Manganese in PDB, part 101 (files: 4001-4040),
PDB 7obe-9xim
Experimental structures of coordination spheres of Manganese (Mn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Manganese atoms. PDB files: 4001-4040 (PDB 7obe-9xim).
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7obe (Mn: 4) - X-Ray Structure of the Phosphatase PAPP5 From Arabidopsis Thaliana
Other atoms:
Cl (2);
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7ody (Mn: 12) - Cyanophage S-2L Mazg-Like Pyrophosphohydrolase Bound to Dgdp and Three Catalytic MN2+ Ions Per Active Site
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7oj5 (Mn: 48) - Cryo-Em Structure of Medicago Truncatula HISN5 Protein
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7ojl (Mn: 1) - Lassa Virus L Protein in A Pre-Initiation Conformation [Preinitiation]
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7ojn (Mn: 5) - Lassa Virus L Protein in An Elongation Conformation [Elongation]
Other atoms:
Zn (1);
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7om7 (Mn: 1) - Thosea Asigna Virus Rdrp Domain in Complex with Rna and Nucleotide Umpnpp
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7omb (Mn: 4) - Crystal Structure of Kod Dna Polymerase in A Ternary Complex with A P/T Duplex Containing An Extended 5' Single Stranded Template Overhang
Other atoms:
Mg (2);
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7omg (Mn: 1) - Crystal Structure of Kod Dna Polymerase in A Ternary Complex with An Uracil Containing Template
Other atoms:
Ca (2);
Cl (1);
Mg (2);
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7otn (Mn: 2) - Hiv-1 Reverse Transcriptase Complex with Dna and Inhibitor Rmc-247
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7rcv (Mn: 8) - High-Resolution Structure of Photosystem II From the Mesophilic Cyanobacterium, Synechocystis Sp. Pcc 6803
Other atoms:
Cl (4);
Mg (70);
Fe (6);
Ca (8);
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7rpo (Mn: 4) - Archaeal Dna Ligase and Heterotrimeric Pcna in Complex with Non- Ligatable Dna
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7rpw (Mn: 4) - Archaeal Dna Ligase and Heterotrimeric Pcna in Complex with Adenylated Dna
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7rpx (Mn: 3) - Archaeal Dna Ligase and Heterotrimeric Pcna in Complex with End-Joined Dna
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7rue (Mn: 4) - Dahp Synthase Complexed with Trifluoropyruvate Semicarbazone
Other atoms:
F (12);
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7s0y (Mn: 1) - Structures of Tcdb in Complex with CDC42
Other atoms:
Mg (1);
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7s0z (Mn: 2) - Structures of Tcdb in Complex with R-Ras
Other atoms:
Mg (5);
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8ick (Mn: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar), MGCL2 (5 Millimolar), and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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8icn (Mn: 1) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Atp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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8ico (Mn: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Azt-Tp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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8icp (Mn: 1) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
-
8icr (Mn: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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8ics (Mn: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dctp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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8ict (Mn: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dctp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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8icu (Mn: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Ddatp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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8icv (Mn: 1) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dgtp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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8icw (Mn: 1) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dttp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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8icx (Mn: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Dttp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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8icy (Mn: 1) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + Thymidine- 5'-Triphosphate, Soaked in the Presence of Dttp and MNCL2
Other atoms:
Na (2);
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8prk (Mn: 6) - The R78K and D117E Active Site Variants of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies and Mechanistic Implications
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8xia (Mn: 2) - X-Ray Analysis of D-Xylose Isomerase at 1.9 Angstroms: Native Enzyme in Complex with Substrate and with A Mechanism-Designed Inactivator
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9ica (Mn: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyadenosine-5'-O-(1-Thiotriphosphate), Soaked in the Presence of Datp(Alpha)S and MNCL2
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9icl (Mn: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of Pyrophosphate and MNCL2
Other atoms:
Na (2);
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9icq (Mn: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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9icr (Mn: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxycytidine-5'-Triphosphate, Soaked in the Presence of Dctp and MNCL2
Other atoms:
Na (2);
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9ics (Mn: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2',3'- Dideoxycytidine-5'-Triphosphate, Soaked in the Presence of Ddctp and MNCL2
Other atoms:
Na (2);
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9ict (Mn: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyguanosine-5'-Triphosphate, Soaked in the Presence of Dgtp and MNCL2
Other atoms:
Na (2);
-
9icu (Mn: 1) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of Dttp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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9xia (Mn: 2) - X-Ray Analysis of D-Xylose Isomerase at 1.9 Angstroms: Native Enzyme in Complex with Substrate and with A Mechanism-Designed Inactivator
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9xim (Mn: 8) - Protein Engineering of Xylose (Glucose) Isomerase From Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
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