Manganese in PDB 7lp7: The Crystal Structure of the Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000983476

The structure of The Crystal Structure of the Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000983476, PDB code: 7lp7 was solved by M.G.Cuypers, P.J.Slavish, Z.Rankovic, S.W.White, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.79 / 2.50
Space group	I 4 2 2
Cell size a, b, c (Å), α, β, γ (°)	89.578, 89.578, 133.759, 90, 90, 90
R / Rfree (%)	21.6 / 25.7

The binding sites of Manganese atom in the The Crystal Structure of the Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000983476 (pdb code 7lp7). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the The Crystal Structure of the Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000983476, PDB code: 7lp7:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the The Crystal Structure of the Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000983476


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of The Crystal Structure of the Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000983476 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn203 b:64.7 occ:1.00 O A:ILE120 2.0 70.5 1.0 OD2 A:ASP108 2.1 64.3 1.0 OE2 A:GLU119 2.1 60.2 1.0 O01 A:YAD201 2.1 73.0 1.0 O08 A:YAD201 2.2 63.0 1.0 NE2 A:HIS41 2.3 70.8 1.0 C02 A:YAD201 2.8 64.9 1.0 C07 A:YAD201 2.8 68.8 1.0 CG A:ASP108 3.0 63.9 1.0 CD A:GLU119 3.1 60.6 1.0 C A:ILE120 3.1 63.3 1.0 CE1 A:HIS41 3.1 66.3 1.0 OD1 A:ASP108 3.3 64.9 1.0 O A:HOH302 3.4 66.4 1.0 CD2 A:HIS41 3.4 72.5 1.0 OE1 A:GLU119 3.5 71.6 1.0 N A:ILE120 3.5 61.4 1.0 CA A:ILE120 3.8 60.5 1.0 MN A:MN204 3.9 70.9 1.0 N A:GLY121 4.1 64.2 1.0 N06 A:YAD201 4.2 71.5 1.0 C03 A:YAD201 4.2 72.4 1.0 CG A:GLU119 4.3 67.5 1.0 ND1 A:HIS41 4.3 69.2 1.0 CB A:ILE120 4.3 61.1 1.0 CB A:ASP108 4.4 62.4 1.0 C A:GLU119 4.4 63.7 1.0 CA A:GLY121 4.4 63.0 1.0 CG A:HIS41 4.4 60.3 1.0 O25 A:YAD201 4.7 71.5 1.0 CA A:GLU119 4.8 63.6 1.0 O A:HOH307 4.8 59.4 1.0 CG2 A:ILE120 4.9 57.3 1.0 C24 A:YAD201 5.0 69.9 1.0

Manganese binding site 2 out of 2 in the The Crystal Structure of the Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000983476


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of The Crystal Structure of the Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000983476 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn204 b:70.9 occ:1.00 O25 A:YAD201 1.9 71.5 1.0 OD1 A:ASP108 2.1 64.9 1.0 OE2 A:GLU80 2.1 68.2 1.0 O01 A:YAD201 2.2 73.0 1.0 O A:HOH302 2.2 66.4 1.0 C24 A:YAD201 2.8 69.9 1.0 CG A:ASP108 3.2 63.9 1.0 CD A:GLU80 3.2 60.5 1.0 C02 A:YAD201 3.2 64.9 1.0 C03 A:YAD201 3.5 72.4 1.0 OD2 A:ASP108 3.7 64.3 1.0 CE1 A:HIS41 3.8 66.3 1.0 MN A:MN203 3.9 64.7 1.0 N26 A:YAD201 3.9 72.4 1.0 OE1 A:GLU80 4.0 71.4 1.0 CG A:GLU80 4.1 57.7 1.0 O A:PRO107 4.1 68.2 1.0 C27 A:YAD201 4.2 79.7 1.0 CB A:ASP108 4.3 62.4 1.0 CB A:GLU80 4.3 56.1 1.0 O A:LEU106 4.3 62.0 1.0 CA A:ASP108 4.3 62.1 1.0 OE1 A:GLU119 4.3 71.6 1.0 C A:PRO107 4.4 62.4 1.0 NE2 A:HIS41 4.4 70.8 1.0 N A:ASP108 4.5 61.2 1.0 OE2 A:GLU119 4.6 60.2 1.0 C07 A:YAD201 4.6 68.8 1.0 ND1 A:HIS41 4.8 69.2 1.0 N04 A:YAD201 4.9 75.0 1.0 CD A:GLU119 4.9 60.6 1.0

M.G.Cuypers, P.J.Slavish, Z.Rankovic, S.W.White. The Crystal Structure of the Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000983476 To Be Published.