Manganese in PDB, part 120 (files: 4761-4800),
PDB 9c9w-9j1a
Experimental structures of coordination spheres of Manganese (Mn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Manganese atoms. PDB files: 4761-4800 (PDB 9c9w-9j1a).
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9c9w (Mn: 1) - Dimerized Human TOP3B-TDRD3 Core Complex with A Dna Mismatch Bubble
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9c9y (Mn: 2) - Human TOP3B-TDRD3 Core Complex in Dna Pre-Cleavage State
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9ca0 (Mn: 1) - Human TOP3B-TDRD3 Core Complex in Dna Pre-Cleavage State
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9ca1 (Mn: 2) - Human TOP3B-TDRD3 Core Complex in Dna Religation State
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9ca4 (Mn: 2) - Human TOP3B-TDRD3 Core Complex in Rna Rejoining State
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9cag (Mn: 2) - Human TOP3B-TDRD3 Core Complex in Rna Pre-Cleavage State
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9cah (Mn: 1) - Human TOP3B-TDRD3 Complex
Other atoms:
Zn (3);
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9caj (Mn: 1) - Human TOP3B-TDRD3 Core Complex in Pre-Cleavage State with Ssdna 5'- Acagatatt-3
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9cak (Mn: 2) - Human TOP3B-TDRD3 Core Complex in Dna Rejoining State with Ssdna 5'- Gacagatatt-3
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9cal (Mn: 1) - Human TOP3B-TDRD3 Core Complex in Post-Cleavage State with Ssdna 5'- Acagatatt-3
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9ckv (Mn: 3) - Cryo-Em Structure of ALPHA5BETA1 Integrin in Complex with Neonectin
Other atoms:
Ca (4);
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9cq5 (Mn: 8) - Mn-Bound Rubisco From Spinach with Cabp Inhibitor
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9dp2 (Mn: 1) - APE1 N174A Product Complex with Abasic Dna
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9dq1 (Mn: 2) - Crystal Structure of Hrmj From Streptomyces Sp. Cfmr 7 (Hrmj-Ssc) Complexed with Manganese (II), 2-Oxoglutarate and 6-Nitronorleucine
Other atoms:
I (7);
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9e1t (Mn: 2) - Cryoem Structure of LARGE1 Bound to Udp
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9eh5 (Mn: 8) - Structure of A Mutated Photosystem II Complex Reveals Changes to the Hydrogen-Bonding Network That Affect Proton Egress During O-O Bond Formation
Other atoms:
Cl (4);
Ca (8);
Mg (70);
Fe (6);
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9ere (Mn: 3) - SLFN11 Dimer Bound to Trna-Leu-Taa
Other atoms:
Zn (2);
Mg (4);
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9erf (Mn: 3) - SLFN11 Dimer Bound to Trna-Met-Cat
Other atoms:
Zn (2);
Mg (3);
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9etk (Mn: 1) - Crystal Structure of Vibrio Cholerae Rnase Am
Other atoms:
Mg (2);
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9f6n (Mn: 1) - Human Divalent Metal Transporter 1 (DMT1/SLC11A2) in Complex with Manganese, in An Occluded State
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9f6p (Mn: 1) - Human NRAMP1 (SLC11A1) in Complex with Manganese, Towards the Inward- Open State
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9fek (Mn: 12) - Crystal Structure of Guanidinase From Nitrospira Inopinata
Other atoms:
Ni (12);
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9fz6 (Mn: 5) - A 2.58A Crystal Structure of S. Aureus Dna Gyrase and Dna with Metals Identified Through Anomalous Scattering
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9gmw (Mn: 3) - SLFN11 Wt Dimer Bound to Trna-Leu-Taa (Pre-Cleavage State)
Other atoms:
Zn (2);
Mg (4);
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9gmx (Mn: 2) - SLFN11 Wt Dimer Bound to Trna-Leu-Taa (Post-Cleavage State)
Other atoms:
Mg (4);
Zn (2);
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9hsh (Mn: 1) - Crystal Structure of C-Terminal Catalytic Domain of Plasmodium Falciparum Ctp:Phosphocholine Cytidylyltransferase with Cytidine- Triphosphate
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9ica (Mn: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyadenosine-5'-O-(1-Thiotriphosphate), Soaked in the Presence of Datp(Alpha)S and MNCL2
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9icl (Mn: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of Pyrophosphate and MNCL2
Other atoms:
Na (2);
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9icq (Mn: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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9icr (Mn: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxycytidine-5'-Triphosphate, Soaked in the Presence of Dctp and MNCL2
Other atoms:
Na (2);
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9ics (Mn: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2',3'- Dideoxycytidine-5'-Triphosphate, Soaked in the Presence of Ddctp and MNCL2
Other atoms:
Na (2);
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9ict (Mn: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + 2'- Deoxyguanosine-5'-Triphosphate, Soaked in the Presence of Dgtp and MNCL2
Other atoms:
Na (2);
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9icu (Mn: 1) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of Dttp (1 Millimolar) and MNCL2 (5 Millimolar)
Other atoms:
Na (2);
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9ij3 (Mn: 1) - Cryo-Em Structure of Mili-Pirna-Target (26-Nt)
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9ixc (Mn: 4) - Crystal Structure of Manganese-Rebound N(Omega)-Hydroxy-L-Arginine Hydrolase with Oxidized CYS86
Other atoms:
Mg (1);
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9ixd (Mn: 2) - Crystal Structure of Copper-Bound N(Omega)-Hydroxy-L-Arginine Hydrolase with Oxidized CYS86
Other atoms:
Mg (2);
Cu (2);
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9ixe (Mn: 2) - Crystal Structure of Copper-Bound N(Omega)-Hydroxy-L-Arginine Hydrolase Without Oxidized CYS86
Other atoms:
Mg (1);
Cu (3);
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9ixf (Mn: 1) - Crystal Structure of Manganese-Free N(Omega)-Hydroxy-L-Arginine Hydrolase with Oxidized CYS86.
Other atoms:
Mg (4);
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9ixg (Mn: 1) - Crystal Structure of Manganese-Free N(Omega)-Hydroxy-L-Arginine Hydrolase Without Oxidized CYS86
Other atoms:
Mg (3);
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9j1a (Mn: 1) - Structure of Cona Without Ligand
Other atoms:
Ca (1);
Page generated: Tue Feb 25 11:30:07 2025
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