Atomistry » Manganese » PDB 2a7a-2axt » 2amh
Atomistry »
  Manganese »
    PDB 2a7a-2axt »
      2amh »

Manganese in PDB 2amh: Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei

Protein crystallography data

The structure of Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei, PDB code: 2amh was solved by J.Caruthers, E.Merritt, Structural Genomics Of Pathogenic Protozoaconsortium (Sgpp), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.00 / 2.00
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 97.068, 97.068, 48.894, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 23.1

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei (pdb code 2amh). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 3 binding sites of Manganese where determined in the Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei, PDB code: 2amh:
Jump to Manganese binding site number: 1; 2; 3;

Manganese binding site 1 out of 3 in 2amh

Go back to Manganese Binding Sites List in 2amh
Manganese binding site 1 out of 3 in the Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn1001

b:44.0
occ:1.00
O A:HOH3080 2.2 37.8 1.0
O3 A:SO4401 2.3 30.0 1.0
OE1 A:GLU45 2.4 33.6 1.0
O A:HOH3086 2.4 31.9 1.0
O1 A:SO4400 2.4 31.7 1.0
CD A:GLU45 3.4 33.6 1.0
S A:SO4401 3.4 29.1 1.0
O2 A:SO4401 3.5 30.6 1.0
S A:SO4400 3.7 32.0 1.0
NZ A:LYS64 3.7 20.5 1.0
OE2 A:GLU45 3.8 33.7 1.0
O2 A:SO4400 3.8 31.5 1.0
MN A:MN2001 4.0 25.5 1.0
O A:HOH3028 4.1 25.2 1.0
CE A:LYS64 4.3 22.9 1.0
O1 A:SO4401 4.4 29.7 1.0
O4 A:SO4401 4.4 29.9 1.0
NZ A:LYS101 4.4 30.4 1.0
O3 A:SO4400 4.4 30.2 1.0
O4 A:SO4400 4.7 32.0 1.0
CE A:LYS101 4.7 27.3 1.0
CG A:GLU45 4.7 33.6 1.0
O A:HOH3064 4.7 37.7 1.0

Manganese binding site 2 out of 3 in 2amh

Go back to Manganese Binding Sites List in 2amh
Manganese binding site 2 out of 3 in the Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn2001

b:25.5
occ:1.00
O A:HOH3087 1.9 21.7 1.0
OE2 A:GLU45 2.1 33.7 1.0
OD1 A:ASP89 2.2 18.4 1.0
O1 A:SO4400 2.3 31.7 1.0
O4 A:SO4400 2.5 32.0 1.0
S A:SO4400 3.0 32.0 1.0
CD A:GLU45 3.2 33.6 1.0
CG A:ASP89 3.3 17.4 1.0
OE2 A:GLU100 3.5 33.0 1.0
OE1 A:GLU45 3.6 33.6 1.0
OD2 A:ASP89 3.7 17.7 1.0
CD A:GLU100 3.8 31.4 1.0
NZ A:LYS64 4.0 20.5 1.0
O3 A:SO4400 4.0 30.2 1.0
O A:HOH3086 4.0 31.9 1.0
MN A:MN1001 4.0 44.0 1.0
O2 A:SO4400 4.1 31.5 1.0
OE1 A:GLU100 4.2 30.8 1.0
CG A:GLU100 4.3 26.9 1.0
O A:GLN90 4.4 15.9 1.0
CB A:ASP89 4.5 16.6 1.0
CG A:GLU45 4.5 33.6 1.0
N A:GLN90 4.6 16.1 1.0
CE A:LYS64 4.6 22.9 1.0
CG2 A:ILE60 4.7 21.9 1.0
CD1 A:ILE60 4.7 21.8 1.0
CA A:ASP89 4.8 16.8 1.0
CB A:GLU45 4.8 34.1 1.0
O A:HOH3056 5.0 44.5 1.0

Manganese binding site 3 out of 3 in 2amh

Go back to Manganese Binding Sites List in 2amh
Manganese binding site 3 out of 3 in the Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 3 of Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn3001

b:33.1
occ:1.00
NE2 A:HIS140 2.2 22.7 1.0
O A:HOH3083 2.3 34.6 1.0
O A:HOH3084 2.3 31.2 1.0
O A:HOH3085 2.4 36.0 1.0
O A:HOH3013 2.4 25.8 1.0
O A:HOH3081 2.5 25.4 1.0
CD2 A:HIS140 3.1 20.7 1.0
CE1 A:HIS140 3.3 22.6 1.0
OE1 A:GLU58 3.8 24.4 1.0
CG A:HIS140 4.3 19.5 1.0
O A:HOH3012 4.3 43.4 1.0
ND1 A:HIS140 4.4 21.9 1.0
CB A:PHE54 4.6 25.0 1.0

Reference:

J.Caruthers, E.Merritt, Structural Genomics Of Pathogenic Protozoa Consortium (Sgpp). Crystal Structure of Maf-Like Protein TBRU21784AAA From T.Brucei To Be Published.
Page generated: Sat Oct 5 13:27:41 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy