Manganese in PDB, part 65 (files: 2561-2600),
PDB 5dcd-5ekd
Experimental structures of coordination spheres of Manganese (Mn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Manganese atoms. PDB files: 2561-2600 (PDB 5dcd-5ekd).
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5dcd (Mn: 4) - Neisseria Meningitidis 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase Regulated (Tyrosine)
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5dce (Mn: 4) - Neisseria Meningitidis 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase Regulated (Tryptophan)
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5dcr (Mn: 1) - R2-Like Ligand-Binding Oxidase with Aerobically Reconstituted Mn/Fe Cofactor (Short Soak)
Other atoms:
Fe (2);
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5dcs (Mn: 2) - R2-Like Ligand-Binding Oxidase with Aerobically Reconstituted Mn/Fe Cofactor (Long Soak)
Other atoms:
Fe (1);
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5ddq (Mn: 5) - L-Glutamine Riboswitch Bound with L-Glutamine Soaked with MN2+
Other atoms:
Mg (3);
Na (12);
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5ddy (Mn: 8) - Binary Complex of Human Polymerase Lambda with Dctp
Other atoms:
Mg (4);
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5deb (Mn: 2) - 2009 H1N1 Pa Endonuclease Mutant E119D in Complex with Rump
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5des (Mn: 2) - 2009 H1N1 Pa Endonuclease Domain
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5dg0 (Mn: 7) - Human APE1 Phosphorothioate Substrate Complex with MN2+
Other atoms:
Cl (1);
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5dgc (Mn: 2) - Reaction of Phosphorylated Chey with Imidazole 2 of 3
Other atoms:
F (6);
Cl (1);
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5dh7 (Mn: 11) - Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction-G12A Mutant in MN2+
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5di2 (Mn: 7) - Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction-Wt Ribozyme in MN2+ at High pH
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5di4 (Mn: 11) - Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction-Wt Ribozyme in MN2+ at Low pH
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5dkf (Mn: 2) - Reaction of Phosphorylated Chey with Imidazole 3 of 3
Other atoms:
F (6);
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5dnl (Mn: 6) - Crystal Structure of Igpd From Pyrococcus Furiosus in Complex with (S)-C348
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5dnx (Mn: 6) - Crystal Structure of Igpd From Pyrococcus Furiosus in Complex with (R)-C348
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5e2l (Mn: 2) - 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase From Mycobacterium Tuberculosis in Complex with D-Phenylalanine
Other atoms:
Cl (5);
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5e3t (Mn: 2) - Crystal Structure of Phosphatidylinositol-4-Phosphate 5-Kinase
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5e3u (Mn: 2) - Crystal Structure of Phosphatidylinositol-4-Phosphate 5-Kinase
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5e40 (Mn: 2) - 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase From Mycobacterium Tuberculosis with D-Tyrosine Bound in the Phenylalanine Binding Site
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5e4n (Mn: 2) - 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase From Mycobacterium Tuberculosis with D-Tyrosine Bound in the Tyrosine and Phenylalanine Binding Sites
Other atoms:
Cl (4);
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5e5g (Mn: 2) - 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase with D-Tryptophan Bound in the Tryptophan and Phenylalanine Binding Sites
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5e6h (Mn: 1) - A Linked Jumonji Domain of the KDM5A Lysine Demethylase
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5e79 (Mn: 8) - Macromolecular Diffractive Imaging Using Imperfect Crystals
Other atoms:
Mg (74);
Fe (6);
Ca (8);
Cl (6);
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5e7c (Mn: 8) - Macromolecular Diffractive Imaging Using Imperfect Crystals - Bragg Data
Other atoms:
Mg (74);
Fe (6);
Ca (8);
Cl (6);
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5e7z (Mn: 2) - 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase From Mycobacterium Tuberculosis in Complex with D/L-Tryptophan and D- Phenylalanine
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5e9h (Mn: 1) - Structural Insights of Isocitrate Lyases From Fusarium Graminearum
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5eaq (Mn: 6) - Two Active Site Divalent Ion in the Crystal Structure of the Hammerhead Ribozyme Bound to A Transition State Analog-MN2+
Other atoms:
V (1);
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5ega (Mn: 2) - 2009 H1N1 Pa Endonuclease Domain in Complex with An N-Acylhydrazone Inhibitor
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5ej4 (Mn: 8) - Ecmend-Thdp-MN2+ Complex Soaked with 2-Ketoglutarate For 15 Min
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5ej5 (Mn: 8) - Ecmend-Thdp-MN2+ Complex Soaked with 2-Ketoglutarate For 1.5 H
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5ej6 (Mn: 8) - Ecmend-Thdp-MN2+ Complex Soaked with 2-Ketoglutarate For 2MIN Then Soaked with Isochorismate For 2 Min
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5ej7 (Mn: 9) - Ecmend-Thdp-MN2+ Complex Soaked with 2-Ketoglutarate For 21 S
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5ej8 (Mn: 8) - Ecmend-Thdp-MN2+ Complex Structure Soaked with 2-Ketoglutarate For 2 Min
Other atoms:
Mg (15);
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5ej9 (Mn: 8) - Ecmend-Thdp-MN2+ Complex Soaked with 2-Ketoglutarate For 2 Min and Isochorismate For 13 Min
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5eja (Mn: 8) - Ecmend-Thdp-MN2+ Complex Soaked with 2-Ketoglutarate For 2 Min and Soaked with Isochorismate For 7 Min
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5eji (Mn: 1) - Crystal Structure of Nad Kinase W78F Mutant From Listeria Monocytogenes in Complex with Nadp/Mn++/Ppi
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5ejm (Mn: 8) - Thdp-MN2+ Complex of R413A Variant of Ecmend Soaked with 2- Ketoglutarate For 35 Min
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5ekb (Mn: 1) - R2-Like Ligand-Binding Oxidase with Aerobically Reconstituted Mn/Fe Cofactor (Reconstituted in Solution)
Other atoms:
Fe (1);
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5ekd (Mn: 4) - Human Mitochondrial Tryptophanyl-Trna Synthetase Bound By Indolmycin and Mn*Atp.
Page generated: Thu Dec 28 10:57:39 2023
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