Manganese in PDB 5e9h: Structural Insights of Isocitrate Lyases From Fusarium Graminearum

All present enzymatic activity of Structural Insights of Isocitrate Lyases From Fusarium Graminearum:
4.1.3.1; 4.1.3.30;

The structure of Structural Insights of Isocitrate Lyases From Fusarium Graminearum, PDB code: 5e9h was solved by Y.Park, Y.Cho, Y.-H.Lee, Y.-W.Lee, S.Rhee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.40 / 2.30
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	124.475, 124.475, 160.350, 90.00, 90.00, 120.00
R / Rfree (%)	18.6 / 22.6

The binding sites of Manganese atom in the Structural Insights of Isocitrate Lyases From Fusarium Graminearum (pdb code 5e9h). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Structural Insights of Isocitrate Lyases From Fusarium Graminearum, PDB code: 5e9h:

Manganese binding site 1 out of 1 in the Structural Insights of Isocitrate Lyases From Fusarium Graminearum


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structural Insights of Isocitrate Lyases From Fusarium Graminearum within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn601 b:59.8 occ:1.00 OD2 A:ASP177 2.4 28.4 1.0 O A:HOH714 2.4 32.1 1.0 O A:HOH824 2.4 28.9 1.0 O A:HOH727 2.5 29.1 1.0 O A:HOH716 2.6 29.5 1.0 O A:HOH719 2.8 24.2 1.0 CG A:ASP177 3.4 25.8 1.0 O7 A:MLI602 3.7 38.5 1.0 OD1 A:ASP177 3.8 30.4 1.0 NH1 A:ARG252 3.9 29.9 1.0 OD2 A:ASP123 3.9 30.7 1.0 O6 A:MLI602 4.1 32.3 1.0 N A:TRP108 4.1 28.1 1.0 NZ A:LYS213 4.1 38.1 1.0 OH A:TYR104 4.2 26.0 1.0 N A:GLY107 4.2 28.1 1.0 C2 A:MLI602 4.3 33.4 1.0 CE1 A:HIS204 4.4 23.3 1.0 CA A:GLY107 4.4 27.6 1.0 OD1 A:ASP179 4.5 31.6 1.0 OD1 A:ASP123 4.5 26.2 1.0 CG A:ASP123 4.6 32.2 1.0 C A:GLY107 4.7 26.2 1.0 CB A:ASP177 4.7 22.7 1.0 O A:HOH708 4.7 33.1 1.0 CB A:TRP108 4.8 28.5 1.0 CE A:LYS213 4.8 39.1 1.0 OE2 A:GLU206 4.8 31.0 1.0 NE2 A:HIS204 4.9 25.6 1.0 CA A:TRP108 4.9 32.0 1.0

Y.Park, Y.Cho, Y.-H.Lee, Y.-W.Lee, S.Rhee. Crystal Structure and Functional Analysis of Isocitrate Lyases From Magnaporthe Oryzae and Fusarium Graminearum J.Struct.Biol. V. 194 395 2016.
ISSN: ESSN 1095-8657
PubMed: 27016285
DOI: 10.1016/J.JSB.2016.03.019