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Manganese in PDB 5eji: Crystal Structure of Nad Kinase W78F Mutant From Listeria Monocytogenes in Complex with Nadp/Mn++/Ppi

Enzymatic activity of Crystal Structure of Nad Kinase W78F Mutant From Listeria Monocytogenes in Complex with Nadp/Mn++/Ppi

All present enzymatic activity of Crystal Structure of Nad Kinase W78F Mutant From Listeria Monocytogenes in Complex with Nadp/Mn++/Ppi:
2.7.1.23;

Protein crystallography data

The structure of Crystal Structure of Nad Kinase W78F Mutant From Listeria Monocytogenes in Complex with Nadp/Mn++/Ppi, PDB code: 5eji was solved by G.Poncet-Montange, L.Assairi, M.Gelin, S.Pochet, G.Labesse, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 63.08 / 2.29
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 63.466, 74.389, 119.012, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 23.7

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Nad Kinase W78F Mutant From Listeria Monocytogenes in Complex with Nadp/Mn++/Ppi (pdb code 5eji). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Nad Kinase W78F Mutant From Listeria Monocytogenes in Complex with Nadp/Mn++/Ppi, PDB code: 5eji:

Manganese binding site 1 out of 1 in 5eji

Go back to Manganese Binding Sites List in 5eji
Manganese binding site 1 out of 1 in the Crystal Structure of Nad Kinase W78F Mutant From Listeria Monocytogenes in Complex with Nadp/Mn++/Ppi


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Nad Kinase W78F Mutant From Listeria Monocytogenes in Complex with Nadp/Mn++/Ppi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn302

b:66.0
occ:0.67
O A:POP303 2.1 61.2 0.5
O3X A:NAP301 2.1 88.7 1.0
O4 A:POP303 2.3 80.8 0.5
P2 A:POP303 2.6 81.8 0.5
O1A A:NAP301 2.8 58.7 0.3
O1N A:NAP301 3.1 63.4 1.0
O3 A:NAP301 3.2 78.1 0.7
O6 A:POP303 3.4 83.8 0.5
PA A:NAP301 3.4 54.9 0.7
P1 A:POP303 3.5 64.1 0.5
P2B A:NAP301 3.6 87.1 1.0
PN A:NAP301 3.6 61.2 1.0
O5B A:NAP301 3.9 55.4 1.0
O1 A:POP303 3.9 59.0 0.5
N A:GLY46 3.9 47.5 1.0
O5 A:POP303 3.9 80.0 0.5
C2B A:NAP301 4.0 60.5 1.0
O2N A:NAP301 4.0 60.5 0.3
C3B A:NAP301 4.1 58.8 1.0
O2B A:NAP301 4.3 61.1 1.0
O2X A:NAP301 4.3 84.4 1.0
CA A:GLY46 4.3 44.7 1.0
O3 A:POP303 4.4 67.7 0.5
O1X A:NAP301 4.5 75.4 1.0
O2 A:POP303 4.5 71.3 0.5
N A:ASP45 4.8 47.1 1.0
O2A A:NAP301 4.8 59.0 0.8
C5B A:NAP301 4.9 55.9 1.0
C A:ASP45 4.9 48.5 1.0
C4B A:NAP301 5.0 57.7 1.0

Reference:

G.Poncet-Montange, L.Assairi, M.Gelin, S.Pochet, G.Labesse. Crystal Structure of Nad Kinase W78F Mutant From Listeria Monocytogenes in Complex with Nadp/Mn++/Ppi To Be Published.
Page generated: Sun Oct 6 00:04:42 2024

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