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Manganese in PDB 2q0m: Tricarbonylmanganese(I)-Lysozyme Complex : A Structurally Characterized Organometallic Protein

Enzymatic activity of Tricarbonylmanganese(I)-Lysozyme Complex : A Structurally Characterized Organometallic Protein

All present enzymatic activity of Tricarbonylmanganese(I)-Lysozyme Complex : A Structurally Characterized Organometallic Protein:
3.2.1.17;

Protein crystallography data

The structure of Tricarbonylmanganese(I)-Lysozyme Complex : A Structurally Characterized Organometallic Protein, PDB code: 2q0m was solved by M.Razavet, V.Artero, C.Cavazza, Y.Oudart, J.C.Fontecilla-Camps, M.Fontecave, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 1.70
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.542, 79.542, 36.392, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 24.9

Other elements in 2q0m:

The structure of Tricarbonylmanganese(I)-Lysozyme Complex : A Structurally Characterized Organometallic Protein also contains other interesting chemical elements:

Fluorine (F) 3 atoms
Chlorine (Cl) 1 atom
Sodium (Na) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the Tricarbonylmanganese(I)-Lysozyme Complex : A Structurally Characterized Organometallic Protein (pdb code 2q0m). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Tricarbonylmanganese(I)-Lysozyme Complex : A Structurally Characterized Organometallic Protein, PDB code: 2q0m:

Manganese binding site 1 out of 1 in 2q0m

Go back to Manganese Binding Sites List in 2q0m
Manganese binding site 1 out of 1 in the Tricarbonylmanganese(I)-Lysozyme Complex : A Structurally Characterized Organometallic Protein


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Tricarbonylmanganese(I)-Lysozyme Complex : A Structurally Characterized Organometallic Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Mn133

b:29.4
occ:0.80
 C X:CMO134 1.9 29.6 0.8
C X:CMO132 1.9 28.5 0.8
C X:CMO135 1.9 28.8 0.8
O X:HOH137 2.3 23.9 0.8
NE2 X:HIS15 2.4 29.0 1.0
O X:HOH138 2.7 43.2 0.8
O X:CMO132 3.0 27.5 0.8
O X:CMO134 3.0 29.4 0.8
O X:CMO135 3.0 29.6 0.8
CD2 X:HIS15 3.3 27.6 1.0
CE1 X:HIS15 3.4 29.0 1.0
OD2 X:ASP87 3.8 33.0 1.0
CG X:HIS15 4.5 27.6 1.0
ND1 X:HIS15 4.5 29.0 1.0
CG X:ASP87 4.6 30.8 1.0
OD1 X:ASP87 4.8 32.3 1.0
OG1 X:THR89 4.8 25.6 1.0
CG X:ARG14 5.0 30.8 1.0

Reference:

M.Razavet, V.Artero, C.Cavazza, Y.Oudart, C.Lebrun, J.C.Fontecilla-Camps, M.Fontecave. Tricarbonylmanganese(I)-Lysozyme Complex: A Structurally Characterized Organometallic Protein Chem.Commun.(Camb.) 2805 2007.
ISSN: ESSN 1364-548X
PubMed: 17609782
DOI: 10.1039/B703887A
Page generated: Sat Oct 5 14:57:50 2024

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