Manganese in the structure of Crystal Structure of the E. Coli Manganese(II) Superoxide Dismutase Mutant Y174F At 0.90 Angstroms Resolution. (pdb 1ixb)

The binding sites of Manganese atom in the structure of Crystal Structure of the E. Coli Manganese(II) Superoxide Dismutase Mutant Y174F At 0.90 Angstroms Resolution. (pdb code 1ixb). This binding sites where shown with 5.0 Angstroms radius around Manganese atom. The 1ixb structure was solved by B.F.ANDERSON, R.A.EDWARDS, M.M.WHITTAKER, J.W.WHITTAKER, E.N.BAKER, G.B.JAMESON, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 30.0-0.9 Space group P1211 a (A) 46.815 b (A) 45.832 c (A) 96.187 alpha (°) 90.00 beta (°) 98.20 gamma (°) 90.00 Rfactor (%) 11.1 Rfree (%) 12.6 Manganese Binding Sites: Manganese binding site 1 out of 2 in 1ixb Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Manganese in the PDB 1ixb. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: His26, A: His81, A: Trp128, A: Gln146, A: Asp167, A: Trp169, A: His171, A: Ala172, A: Mh2206, conact list: Atom Atom Distance (A) Mn NE2 A:His26 2.17 Mn ND1 A:His26 4.28 Mn CD2 A:His26 3.20 Mn CE1 A:His26 3.15 Mn CG A:His26 4.33 Mn NE2 A:His81 2.13 Mn ND1 A:His81 4.25 Mn CD2 A:His81 3.12 Mn CE1 A:His81 3.12 Mn CG A:His81 4.29 Mn CZ2 A:Trp128 4.45 Mn CH2 A:Trp128 4.93 Mn NE2 A:Gln146 4.72 Mn CB A:Asp167 4.35 Mn OD2 A:Asp167 2.05 Mn OD1 A:Asp167 3.47 Mn CG A:Asp167 3.08 Mn CB A:Trp169 4.60 Mn CG A:Trp169 4.81 Mn NE2 A:His171 2.14 Mn ND1 A:His171 4.30 Mn CD2 A:His171 3.13 Mn CE1 A:His171 3.19 Mn CG A:His171 4.32 Mn CB A:Ala172 4.92 Mn O1 A:Mh2206 2.27 Mn MN A:Mh2206 0.00 interactive model: Manganese binding site 2 out of 2 in 1ixb Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Manganese in the PDB 1ixb. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Manganese atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: His26, B: His81, B: Trp128, B: Gln146, B: Asp167, B: Trp169, B: His171, B: Ala172, B: Mh2206, conact list: Atom Atom Distance (A) Mn NE2 B:His26 2.18 Mn ND1 B:His26 4.27 Mn CD2 B:His26 3.19 Mn CE1 B:His26 3.13 Mn CG B:His26 4.32 Mn NE2 B:His81 2.15 Mn ND1 B:His81 4.26 Mn CD2 B:His81 3.14 Mn CE1 B:His81 3.14 Mn CG B:His81 4.29 Mn CZ2 B:Trp128 4.49 Mn CH2 B:Trp128 4.98 Mn NE2 B:Gln146 4.74 Mn CB B:Asp167 4.34 Mn OD2 B:Asp167 2.04 Mn OD1 B:Asp167 3.46 Mn CG B:Asp167 3.07 Mn CB B:Trp169 4.63 Mn CG B:Trp169 4.80 Mn NE2 B:His171 2.13 Mn ND1 B:His171 4.28 Mn CD2 B:His171 3.13 Mn CE1 B:His171 3.16 Mn CG B:His171 4.32 Mn CB B:Ala172 4.95 Mn O1 B:Mh2206 2.26 Mn MN B:Mh2206 0.00 interactive model: