Manganese in PDB 8c7u: Transcriptional Pleiotropic Repressor Cody From Enterococcus Faecalis in Complex with Leu and A 30-Bp Dna Fragment Encompassing Two Overlapping Binding Sites

The structure of Transcriptional Pleiotropic Repressor Cody From Enterococcus Faecalis in Complex with Leu and A 30-Bp Dna Fragment Encompassing Two Overlapping Binding Sites, PDB code: 8c7u was solved by T.Hainzl, A.E.Sauer-Eriksson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.79 / 3.15
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	86.747, 98.692, 168.363, 90, 90, 90
R / Rfree (%)	24.8 / 28.5

The binding sites of Manganese atom in the Transcriptional Pleiotropic Repressor Cody From Enterococcus Faecalis in Complex with Leu and A 30-Bp Dna Fragment Encompassing Two Overlapping Binding Sites (pdb code 8c7u). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Transcriptional Pleiotropic Repressor Cody From Enterococcus Faecalis in Complex with Leu and A 30-Bp Dna Fragment Encompassing Two Overlapping Binding Sites, PDB code: 8c7u:

Manganese binding site 1 out of 1 in the Transcriptional Pleiotropic Repressor Cody From Enterococcus Faecalis in Complex with Leu and A 30-Bp Dna Fragment Encompassing Two Overlapping Binding Sites


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Transcriptional Pleiotropic Repressor Cody From Enterococcus Faecalis in Complex with Leu and A 30-Bp Dna Fragment Encompassing Two Overlapping Binding Sites within 5.0Å range: probe atom residue distance (Å) B Occ F:Mn101 b:91.0 occ:0.50 N3 F:DA22 4.1 108.4 1.0 O4' E:DT11 4.3 82.4 1.0 N2 F:DG21 4.5 91.7 1.0 C1' F:DA22 4.6 113.2 1.0 C4' E:DT11 4.8 82.8 1.0 C2 F:DA22 4.9 100.4 1.0 O4' F:DA23 4.9 106.8 1.0

T.Hainzl, M.Bonde, F.Almqvist, J.Johansson, A.E.Sauer-Eriksson. Structural Insights Into Cody Activation and Dna Recognition Nucleic Acids Res. 2023.
ISSN: ESSN 1362-4962
DOI: 10.1093/NAR/GKAD512