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Manganese in PDB 7y1u: Crystal Structure of Isocitrate Dehydrogenase From Campylobacter Corcagiensis

Enzymatic activity of Crystal Structure of Isocitrate Dehydrogenase From Campylobacter Corcagiensis

All present enzymatic activity of Crystal Structure of Isocitrate Dehydrogenase From Campylobacter Corcagiensis:
1.1.1.42;

Protein crystallography data

The structure of Crystal Structure of Isocitrate Dehydrogenase From Campylobacter Corcagiensis, PDB code: 7y1u was solved by M.J.Bian, Q.P.Cheng, P.Wang, G.P.Zhu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.93 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 62.501, 92.694, 147.321, 90, 90, 90
R / Rfree (%) 18.8 / 25.9

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Isocitrate Dehydrogenase From Campylobacter Corcagiensis (pdb code 7y1u). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Isocitrate Dehydrogenase From Campylobacter Corcagiensis, PDB code: 7y1u:

Manganese binding site 1 out of 1 in 7y1u

Go back to Manganese Binding Sites List in 7y1u
Manganese binding site 1 out of 1 in the Crystal Structure of Isocitrate Dehydrogenase From Campylobacter Corcagiensis


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Isocitrate Dehydrogenase From Campylobacter Corcagiensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn802

b:85.8
occ:1.00
O3 A:NAP801 3.1 34.7 1.0
O2A A:NAP801 3.1 37.3 1.0
OD2 A:ASP343 3.2 49.7 1.0
C5N A:NAP801 3.3 29.4 1.0
O2N A:NAP801 3.4 42.6 1.0
C6N A:NAP801 3.6 27.9 1.0
OD1 A:ASP545 3.6 29.4 1.0
N A:GLY577 3.7 32.4 1.0
OD2 A:ASP545 3.7 40.4 1.0
O A:HOH1007 3.8 44.2 1.0
PA A:NAP801 3.8 32.7 1.0
CB A:ALA344 3.9 32.1 1.0
PN A:NAP801 3.9 33.9 1.0
CG A:ASP545 4.0 34.9 1.0
C A:GLY576 4.1 31.5 1.0
CG A:ASP343 4.2 40.8 1.0
CA A:GLY576 4.2 34.1 1.0
CA A:GLY577 4.3 35.0 1.0
O5D A:NAP801 4.3 32.9 1.0
C4N A:NAP801 4.5 28.4 1.0
CA A:ALA344 4.6 34.6 1.0
N A:ALA344 4.6 30.8 1.0
O5B A:NAP801 4.7 40.5 1.0
OD1 A:ASP343 4.8 41.3 1.0
O1A A:NAP801 4.8 39.6 1.0
O A:ALA575 4.8 30.7 1.0
O A:GLY576 5.0 33.9 1.0
N1N A:NAP801 5.0 29.4 1.0

Reference:

M.J.Bian, Q.P.Cheng, P.Wang, G.P.Zhu. Crystal Structure of Isocitrate Dehydrogenase From Campylobacter Corcagiensis To Be Published.
Page generated: Sun Aug 17 00:00:49 2025

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