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Manganese in PDB 7wh4: Crystal Structure of the Padr-Family Transcriptional Regulator RV3488 of Mycobacterium Tuberculosis H37RV in Complex with Manganese Ion

Protein crystallography data

The structure of Crystal Structure of the Padr-Family Transcriptional Regulator RV3488 of Mycobacterium Tuberculosis H37RV in Complex with Manganese Ion, PDB code: 7wh4 was solved by A.Arora, M.Zohib, B.K.Biswal, R.K.Pal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.89 / 2.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 30.491, 47.899, 129.878, 90, 90, 90
R / Rfree (%) 22.1 / 27.2

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of the Padr-Family Transcriptional Regulator RV3488 of Mycobacterium Tuberculosis H37RV in Complex with Manganese Ion (pdb code 7wh4). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Crystal Structure of the Padr-Family Transcriptional Regulator RV3488 of Mycobacterium Tuberculosis H37RV in Complex with Manganese Ion, PDB code: 7wh4:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in 7wh4

Go back to Manganese Binding Sites List in 7wh4
Manganese binding site 1 out of 2 in the Crystal Structure of the Padr-Family Transcriptional Regulator RV3488 of Mycobacterium Tuberculosis H37RV in Complex with Manganese Ion


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of the Padr-Family Transcriptional Regulator RV3488 of Mycobacterium Tuberculosis H37RV in Complex with Manganese Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn201

b:91.4
occ:1.00
OE2 A:GLU30 2.3 62.6 1.0
NE2 A:HIS34 2.7 70.9 1.0
NE2 A:HIS16 2.7 60.8 1.0
O A:HOH303 2.7 56.0 1.0
CD A:GLU30 3.5 61.2 1.0
CE1 A:HIS16 3.6 60.5 1.0
CD2 A:HIS16 3.6 59.6 1.0
CE1 A:HIS34 3.6 71.1 1.0
CD2 A:HIS34 3.7 69.8 1.0
CG A:GLU30 4.2 58.9 1.0
OE1 A:GLU30 4.4 62.8 1.0
CD A:ARG33 4.6 54.1 1.0
ND1 A:HIS16 4.7 59.6 1.0
CB A:GLU30 4.7 56.1 1.0
CG A:HIS16 4.7 58.4 1.0
ND1 A:HIS34 4.8 70.0 1.0
CG A:HIS34 4.8 68.8 1.0

Manganese binding site 2 out of 2 in 7wh4

Go back to Manganese Binding Sites List in 7wh4
Manganese binding site 2 out of 2 in the Crystal Structure of the Padr-Family Transcriptional Regulator RV3488 of Mycobacterium Tuberculosis H37RV in Complex with Manganese Ion


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure of the Padr-Family Transcriptional Regulator RV3488 of Mycobacterium Tuberculosis H37RV in Complex with Manganese Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn201

b:47.0
occ:1.00
OE2 B:GLU30 2.2 48.5 1.0
NE2 B:HIS34 2.4 60.4 1.0
NE2 B:HIS16 2.5 49.3 1.0
O B:HOH304 2.6 37.2 1.0
O B:HOH311 2.7 24.5 1.0
CE1 B:HIS34 3.3 60.7 1.0
CE1 B:HIS16 3.4 48.5 1.0
CD2 B:HIS16 3.4 48.2 1.0
CD B:GLU30 3.4 48.5 1.0
CD2 B:HIS34 3.5 60.8 1.0
CG B:GLU30 4.1 47.8 1.0
OE1 B:GLU30 4.4 48.9 1.0
ND1 B:HIS34 4.4 60.9 1.0
ND1 B:HIS16 4.5 47.7 1.0
CG B:HIS16 4.5 46.7 1.0
CG B:HIS34 4.6 60.5 1.0

Reference:

A.Arora, M.Zohib, B.K.Biswal, R.K.Pal. Crystal Structure of Padr-Family Transcriptional Regulator RV3488 of Mycobacterium Tuberculosis H37RV in Complex with Manganese Ion To Be Published.
Page generated: Sat Aug 16 23:56:01 2025

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