Manganese in PDB 7ohl: Saftsz Complexed with Gdp, BEF3- and MN2+

The structure of Saftsz Complexed with Gdp, BEF3- and MN2+, PDB code: 7ohl was solved by C.Fernandez-Tornero, F.M.Ruiz, J.M.Andreu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.14 / 1.75
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	72.02, 51.49, 88.02, 90, 110.82, 90
R / Rfree (%)	17 / 21.1

The structure of Saftsz Complexed with Gdp, BEF3- and MN2+ also contains other interesting chemical elements:

Fluorine	(F)	3 atoms
Potassium	(K)	1 atom

The binding sites of Manganese atom in the Saftsz Complexed with Gdp, BEF3- and MN2+ (pdb code 7ohl). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Saftsz Complexed with Gdp, BEF3- and MN2+, PDB code: 7ohl:

Manganese binding site 1 out of 1 in the Saftsz Complexed with Gdp, BEF3- and MN2+


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Saftsz Complexed with Gdp, BEF3- and MN2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn403 b:30.5 occ:1.00 O A:HOH568 2.2 27.8 1.0 F3 A:BEF402 2.2 31.3 1.0 O A:HOH573 2.2 27.2 1.0 O A:HOH538 2.2 32.6 1.0 O1B A:GDP401 2.2 26.4 1.0 O A:HOH521 2.3 33.5 1.0 BE A:BEF402 3.2 28.4 1.0 PB A:GDP401 3.3 30.0 1.0 F1 A:BEF402 3.6 28.8 1.0 O3B A:GDP401 3.6 28.1 1.0 H A:GLY21 3.7 33.1 1.0 HD21 A:ASN44 3.8 33.6 1.0 HA3 A:GLY21 3.9 36.5 1.0 HB2 A:ASP46 3.9 43.8 1.0 OD2 A:ASP46 4.0 40.5 1.0 O3A A:GDP401 4.0 28.9 1.0 O1A A:GDP401 4.1 32.4 1.0 HA3 A:GLY70 4.2 34.6 1.0 HB3 A:ASP46 4.2 43.8 1.0 N A:GLY21 4.3 27.6 1.0 CB A:ASP46 4.4 36.5 1.0 CA A:GLY21 4.5 30.5 1.0 OD1 A:ASN44 4.5 32.2 1.0 O2B A:GDP401 4.6 26.4 1.0 F2 A:BEF402 4.6 30.6 1.0 ND2 A:ASN44 4.6 28.0 1.0 PA A:GDP401 4.6 31.3 1.0 HA2 A:GLY21 4.7 36.5 1.0 HB A:THR109 4.7 32.2 1.0 O A:HOH588 4.7 44.3 1.0 CG A:ASP46 4.8 37.2 1.0 HA2 A:GLY20 4.9 30.6 1.0 HG1 A:THR109 5.0 36.0 1.0 H A:ALA71 5.0 35.0 1.0

F.M.Ruiz, S.Huecas, A.Santos-Aledo, E.A.Prim, J.M.Andreu, C.Fernandez-Tornero. Ftsz Filament Structures in Different Nucleotide States Reveal the Mechanism of Assembly Dynamics. Plos Biol. V. 20 01497 2022.
ISSN: ESSN 1545-7885
PubMed: 35312677
DOI: 10.1371/JOURNAL.PBIO.3001497