Manganese in PDB 7ohg: Structure of Thermus Thermophilus Rel Bound to the Non-Hydrolasable Alarmone Analogue

The structure of Structure of Thermus Thermophilus Rel Bound to the Non-Hydrolasable Alarmone Analogue, PDB code: 7ohg was solved by A.Garcia-Pino, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	88.12 / 2.51
Space group	P 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	88.121, 88.121, 182.889, 90, 90, 90
R / Rfree (%)	20.7 / 24.5

The structure of Structure of Thermus Thermophilus Rel Bound to the Non-Hydrolasable Alarmone Analogue also contains other interesting chemical elements:

Magnesium	(Mg)	1 atom
Chlorine	(Cl)	5 atoms

The binding sites of Manganese atom in the Structure of Thermus Thermophilus Rel Bound to the Non-Hydrolasable Alarmone Analogue (pdb code 7ohg). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Structure of Thermus Thermophilus Rel Bound to the Non-Hydrolasable Alarmone Analogue, PDB code: 7ohg:

Manganese binding site 1 out of 1 in the Structure of Thermus Thermophilus Rel Bound to the Non-Hydrolasable Alarmone Analogue


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structure of Thermus Thermophilus Rel Bound to the Non-Hydrolasable Alarmone Analogue within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn404 b:78.5 occ:1.00 OD1 A:ASP146 2.1 55.9 1.0 NE2 A:HIS52 2.4 48.2 1.0 OD2 A:ASP77 2.6 60.8 1.0 NE2 A:HIS76 2.7 46.7 1.0 O6 A:VE8401 2.8 141.5 1.0 OD1 A:ASP77 3.1 59.0 1.0 CG A:ASP77 3.2 58.1 1.0 CG A:ASP146 3.3 55.0 1.0 CD2 A:HIS52 3.3 47.7 1.0 CD2 A:HIS76 3.4 45.9 1.0 CE1 A:HIS52 3.5 48.6 1.0 CE1 A:HIS76 3.7 46.7 1.0 OD2 A:ASP146 3.9 57.6 1.0 O A:HOH502 4.0 36.7 1.0 O7 A:VE8401 4.0 141.6 1.0 OH A:TYR49 4.0 67.6 1.0 P A:VE8401 4.1 141.5 1.0 CB A:ASP146 4.4 49.1 1.0 OE2 A:GLU104 4.4 57.1 1.0 CG A:HIS52 4.5 47.1 1.0 CG A:HIS76 4.5 45.1 1.0 O A:HOH506 4.6 51.8 1.0 ND1 A:HIS52 4.6 48.4 1.0 O1 A:VE8401 4.6 139.3 1.0 CB A:ASP77 4.7 52.0 1.0 ND1 A:HIS76 4.7 46.3 1.0 O2 A:VE8401 4.9 142.0 1.0 ND2 A:ASN150 4.9 64.8 1.0 OD1 A:ASN150 5.0 64.7 1.0

A.Garcia-Pino, A.Garcia-Pino. N/A N/A.