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Manganese in PDB 7lt2: Structure of A Dsrna-Sensing Cgas-Like Receptor From the Beetle Tribolium Castaneum

Protein crystallography data

The structure of Structure of A Dsrna-Sensing Cgas-Like Receptor From the Beetle Tribolium Castaneum, PDB code: 7lt2 was solved by K.M.Slavik, B.R.Morehouse, P.J.Kranzusch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.99 / 1.58
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 57.405, 70.443, 104.604, 90, 90, 90
R / Rfree (%) 18.6 / 21.5

Manganese Binding Sites:

The binding sites of Manganese atom in the Structure of A Dsrna-Sensing Cgas-Like Receptor From the Beetle Tribolium Castaneum (pdb code 7lt2). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Structure of A Dsrna-Sensing Cgas-Like Receptor From the Beetle Tribolium Castaneum, PDB code: 7lt2:

Manganese binding site 1 out of 1 in 7lt2

Go back to Manganese Binding Sites List in 7lt2
Manganese binding site 1 out of 1 in the Structure of A Dsrna-Sensing Cgas-Like Receptor From the Beetle Tribolium Castaneum


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structure of A Dsrna-Sensing Cgas-Like Receptor From the Beetle Tribolium Castaneum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn401

b:34.0
occ:1.00
O A:LYS292 2.6 25.9 1.0
O A:HOH923 2.7 41.3 1.0
O A:ILE289 2.8 20.1 1.0
O A:HOH875 2.9 33.6 1.0
O A:GLU290 2.9 25.6 1.0
O A:HOH892 3.0 28.9 1.0
O A:HOH883 3.2 51.7 1.0
C A:GLU290 3.5 24.7 1.0
C A:LYS292 3.8 26.9 1.0
CA A:GLU290 3.8 21.0 1.0
O A:HOH570 3.9 34.9 1.0
C A:ILE289 3.9 21.8 1.0
O A:HOH702 4.0 22.2 1.0
N A:LYS292 4.2 27.0 1.0
N A:GLN291 4.3 26.0 1.0
N A:GLU290 4.4 19.5 1.0
C A:GLN291 4.4 30.6 1.0
NE2 A:GLN294 4.6 37.1 1.0
CA A:LYS292 4.6 27.6 1.0
N A:ASP293 4.7 31.4 1.0
O A:HOH565 4.7 23.7 1.0
O A:HOH781 4.7 37.5 1.0
O A:GLN291 4.7 34.1 1.0
CA A:ASP293 4.8 32.7 1.0
CA A:GLN291 4.9 26.5 1.0
OE1 A:GLU290 4.9 32.2 1.0

Reference:

K.M.Slavik, B.R.Morehouse, A.E.Ragucci, W.Zhou, X.Ai, Y.Chen, L.Li, Z.Wei, H.Bahre, M.Konig, R.Seifert, A.S.Y.Lee, H.Cai, J.L.Imler, P.J.Kranzusch. Cgas-Like Receptors Sense Rna and Control 3'2'-Cgamp Signaling in Drosophila. Nature 2021.
ISSN: ESSN 1476-4687
PubMed: 34261127
DOI: 10.1038/S41586-021-03743-5
Page generated: Sun Oct 6 10:01:35 2024

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