Manganese in PDB 6u6b: Structure of Human Dna Polymerase Beta Misinserting Dampnpp Opposite the 5'G of the Cisplatin Pt-Gg Intrastrand Crosslink with Manganese in the Active Site

Enzymatic activity of Structure of Human Dna Polymerase Beta Misinserting Dampnpp Opposite the 5'G of the Cisplatin Pt-Gg Intrastrand Crosslink with Manganese in the Active Site

Protein crystallography data

Other elements in 6u6b:

Manganese Binding Sites:

Manganese binding site 1 out of 2 in 6u6b

Manganese Binding Sites List in 6u6b

Manganese binding site 1 out of 2 in the Structure of Human Dna Polymerase Beta Misinserting Dampnpp Opposite the 5'G of the Cisplatin Pt-Gg Intrastrand Crosslink with Manganese in the Active Site


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structure of Human Dna Polymerase Beta Misinserting Dampnpp Opposite the 5'G of the Cisplatin Pt-Gg Intrastrand Crosslink with Manganese in the Active Site within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn401 b:73.6 occ:1.00 OD2 A:ASP190 1.8 43.0 1.0 O3' P:DC10 1.9 63.5 1.0 OD1 A:ASP192 2.0 61.5 1.0 OD2 A:ASP256 2.0 41.5 1.0 O1A A:DZ4405 2.5 61.7 1.0 CG A:ASP190 2.9 43.9 1.0 C3' P:DC10 3.0 72.4 1.0 CG A:ASP192 3.1 54.0 1.0 CG A:ASP256 3.2 31.4 1.0 H3' P:DC10 3.3 86.9 1.0 H4' P:DC10 3.3 84.1 1.0 OD1 A:ASP190 3.4 44.3 1.0 OD2 A:ASP192 3.5 55.2 1.0 H5'' P:DC10 3.5 73.9 1.0 HB2 A:ASP256 3.6 36.3 1.0 C4' P:DC10 3.6 70.1 1.0 PA A:DZ4405 3.6 47.3 1.0 H5' A:DZ4405 3.8 65.2 1.0 O5' A:DZ4405 3.9 49.4 1.0 CB A:ASP256 4.0 30.2 1.0 MN A:MN402 4.0 54.8 1.0 C5' P:DC10 4.0 61.5 1.0 O2A A:DZ4405 4.1 43.3 1.0 H5'A A:DZ4405 4.1 65.2 1.0 C5' A:DZ4405 4.2 54.4 1.0 CB A:ASP190 4.2 34.7 1.0 OD1 A:ASP256 4.2 34.6 1.0 HB2 A:ASP190 4.3 41.6 1.0 H2'' P:DC10 4.3 78.3 1.0 C2' P:DC10 4.3 65.2 1.0 HB3 A:ASP256 4.4 36.3 1.0 CB A:ASP192 4.4 47.1 1.0 HB3 A:ASP190 4.4 41.6 1.0 HA A:ASP192 4.4 55.9 1.0 HB3 A:ASP192 4.6 56.6 1.0 O5' P:DC10 4.6 60.5 1.0 H A:ASP256 4.8 45.5 1.0 H5' P:DC10 4.9 73.9 1.0 CA A:ASP192 4.9 46.5 1.0 H2' P:DC10 4.9 78.3 1.0 O4' P:DC10 4.9 61.9 1.0

Manganese binding site 2 out of 2 in 6u6b

Manganese Binding Sites List in 6u6b

Manganese binding site 2 out of 2 in the Structure of Human Dna Polymerase Beta Misinserting Dampnpp Opposite the 5'G of the Cisplatin Pt-Gg Intrastrand Crosslink with Manganese in the Active Site


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Structure of Human Dna Polymerase Beta Misinserting Dampnpp Opposite the 5'G of the Cisplatin Pt-Gg Intrastrand Crosslink with Manganese in the Active Site within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn402 b:54.8 occ:1.00 OD2 A:ASP192 1.8 55.2 1.0 OD1 A:ASP190 1.9 44.3 1.0 O2B A:DZ4405 2.0 61.7 1.0 O3G A:DZ4405 2.1 57.7 1.0 O1A A:DZ4405 2.5 61.7 1.0 CG A:ASP192 3.0 54.0 1.0 PB A:DZ4405 3.0 39.8 1.0 CG A:ASP190 3.1 43.9 1.0 PA A:DZ4405 3.1 47.3 1.0 N3A A:DZ4405 3.2 65.8 1.0 O5' A:DZ4405 3.3 49.4 1.0 PG A:DZ4405 3.4 46.7 1.0 H A:SER180 3.4 47.6 1.0 H A:ASP190 3.4 47.4 1.0 O A:ASP190 3.5 45.7 1.0 OD1 A:ASP192 3.5 61.5 1.0 O3B A:DZ4405 3.6 46.6 1.0 HA3 A:GLY179 3.6 39.3 1.0 OD2 A:ASP190 3.6 43.0 1.0 HN3A A:DZ4405 3.9 79.0 1.0 MN A:MN401 4.0 73.6 1.0 C A:ASP190 4.0 39.3 1.0 HG A:SER180 4.1 46.1 1.0 HB2 A:ASP192 4.1 56.6 1.0 CB A:ASP192 4.2 47.1 1.0 N A:ASP190 4.2 39.5 1.0 N A:SER180 4.2 39.7 1.0 OG A:SER180 4.2 38.4 1.0 H A:ASP192 4.3 53.9 1.0 O1G A:DZ4405 4.3 55.3 1.0 CB A:ASP190 4.3 34.7 1.0 O1B A:DZ4405 4.3 32.1 1.0 O2G A:DZ4405 4.4 41.1 1.0 CA A:ASP190 4.4 31.4 1.0 CA A:GLY179 4.4 32.7 1.0 HA2 A:GLY179 4.5 39.3 1.0 C5' A:DZ4405 4.5 54.4 1.0 O2A A:DZ4405 4.6 43.3 1.0 N A:ASP192 4.6 44.9 1.0 H5' A:DZ4405 4.6 65.2 1.0 HB3 A:SER180 4.6 47.8 1.0 H A:GLY189 4.7 45.4 1.0 HB3 A:ASP190 4.7 41.6 1.0 HB3 A:ASP192 4.9 56.6 1.0 N A:MET191 4.9 40.9 1.0 C A:GLY179 4.9 33.1 1.0 HA A:MET191 4.9 43.2 1.0 CB A:SER180 4.9 39.8 1.0 O3' P:DC10 4.9 63.5 1.0 CA A:ASP192 5.0 46.5 1.0 HB2 A:ASP190 5.0 41.6 1.0

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