Manganese in PDB 6h9h: CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease

The structure of CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease, PDB code: 6h9h was solved by P.Pausch, G.Bange, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.25 / 1.75
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	85.563, 100.989, 101.933, 90.00, 90.00, 90.00
R / Rfree (%)	21.2 / 23.7

The binding sites of Manganese atom in the CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease (pdb code 6h9h). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease, PDB code: 6h9h:

Manganese binding site 1 out of 1 in the CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn302 b:40.1 occ:1.00 OD1 B:ASP192 2.0 47.8 1.0 OD1 A:ASP192 2.0 42.6 1.0 NE2 B:HIS194 2.1 41.8 1.0 NE2 A:HIS194 2.1 34.1 1.0 CG B:ASP192 2.8 35.2 1.0 CG A:ASP192 2.8 35.1 1.0 OD2 B:ASP192 2.9 36.3 1.0 OD2 A:ASP192 2.9 39.7 1.0 CD2 B:HIS194 2.9 39.0 1.0 CD2 A:HIS194 2.9 42.6 1.0 CE1 B:HIS194 3.1 44.9 1.0 CE1 A:HIS194 3.2 41.4 1.0 O B:HOH446 4.0 43.7 1.0 O A:HOH469 4.1 43.0 1.0 CG B:HIS194 4.1 36.7 1.0 CG A:HIS194 4.1 35.1 1.0 ND1 B:HIS194 4.2 42.8 1.0 ND1 A:HIS194 4.2 42.4 1.0 CB B:ASP192 4.2 35.8 1.0 CB A:ASP192 4.2 38.6 1.0 O A:ASP192 4.4 29.9 1.0 O B:ASP192 4.4 30.9 1.0 CA B:ASP192 4.7 35.2 1.0 CA A:ASP192 4.7 32.5 1.0 C B:ASP192 4.7 37.6 1.0 C A:ASP192 4.7 32.4 1.0 O B:ILE193 4.8 36.2 1.0 O A:ILE193 4.8 30.9 1.0

A.Ozcan, P.Pausch, A.Linden, A.Wulf, K.Schuhle, J.Heider, H.Urlaub, T.Heimerl, G.Bange, L.Randau. Type IV Crispr Rna Processing and Effector Complex Formation in Aromatoleum Aromaticum. Nat Microbiol V. 4 89 2019.
ISSN: ESSN 2058-5276
PubMed: 30397343
DOI: 10.1038/S41564-018-0274-8