Manganese in PDB 5z5p: Crystal Structure of Cona-R3M

The structure of Crystal Structure of Cona-R3M, PDB code: 5z5p was solved by G.S.Chen, J.H.Gan, R.T.Hu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	58.74 / 1.40
Space group	P 2 21 21
Cell size a, b, c (Å), α, β, γ (°)	58.742, 61.945, 115.960, 90.00, 90.00, 90.00
R / Rfree (%)	19.3 / 24.1

The structure of Crystal Structure of Cona-R3M also contains other interesting chemical elements:

Calcium

(Ca)

3 atoms

The binding sites of Manganese atom in the Crystal Structure of Cona-R3M (pdb code 5z5p). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Crystal Structure of Cona-R3M, PDB code: 5z5p:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the Crystal Structure of Cona-R3M


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Cona-R3M within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn301 b:9.4 occ:1.00 OE2 A:GLU8 2.1 8.7 1.0 O A:HOH438 2.3 10.6 1.0 OD2 A:ASP19 2.3 9.6 1.0 NE2 A:HIS24 2.3 10.9 1.0 O A:HOH401 2.3 11.0 1.0 OD2 A:ASP10 2.3 9.8 1.0 OD1 A:ASP19 2.3 9.3 1.0 CG A:ASP19 2.4 10.2 1.0 CD A:GLU8 3.2 8.7 1.0 CE1 A:HIS24 3.2 11.9 1.0 CD2 A:HIS24 3.2 10.6 1.0 CG A:ASP10 3.3 10.8 1.0 OE1 A:GLU8 3.5 9.0 1.0 CB A:ASP10 3.6 9.9 1.0 CB A:ASP19 3.7 11.2 1.0 O A:HOH467 3.9 8.9 1.0 O A:HOH403 3.9 24.2 1.0 CA A:CA302 4.2 8.4 1.0 OG A:SER34 4.2 12.5 1.0 ND1 A:HIS24 4.4 10.8 1.0 OD1 A:ASP10 4.4 8.7 1.0 CG A:HIS24 4.4 11.6 1.0 O A:HOH408 4.4 26.8 1.0 CA A:ASP19 4.6 13.3 1.0 CG A:GLU8 4.6 8.5 1.0 O A:VAL32 4.6 11.6 1.0

Manganese binding site 2 out of 2 in the Crystal Structure of Cona-R3M


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure of Cona-R3M within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn304 b:13.8 occ:1.00 OE2 B:GLU8 2.1 11.9 1.0 O B:HOH446 2.2 16.6 1.0 NE2 B:HIS24 2.3 15.7 1.0 OD2 B:ASP10 2.3 13.9 1.0 OD1 B:ASP19 2.4 13.0 1.0 O B:HOH402 2.4 13.9 1.0 OD2 B:ASP19 2.4 14.4 1.0 CG B:ASP19 2.5 15.6 1.0 CD B:GLU8 3.1 14.9 1.0 CE1 B:HIS24 3.2 14.2 1.0 CG B:ASP10 3.2 14.4 1.0 CD2 B:HIS24 3.3 15.3 1.0 OE1 B:GLU8 3.5 15.1 1.0 CB B:ASP10 3.6 14.1 1.0 CB B:ASP19 3.8 18.6 1.0 O B:HOH401 3.9 20.0 1.0 O B:HOH442 4.0 13.5 1.0 OG B:SER34 4.2 15.4 1.0 CA B:CA302 4.2 13.7 1.0 OD1 B:ASP10 4.3 13.8 1.0 ND1 B:HIS24 4.4 13.8 1.0 CG B:HIS24 4.4 15.8 1.0 O B:HOH428 4.5 30.0 1.0 CG B:GLU8 4.5 12.9 1.0 O B:VAL32 4.5 14.1 1.0 CA B:ASP19 4.6 20.9 1.0

G.S.Chen, J.H.Gan, R.T.Hu. Crystal Structure of Cona-R3M To Be Published.