Atomistry » Manganese » PDB 4lta-4mu3 » 4lw3
Atomistry »
  Manganese »
    PDB 4lta-4mu3 »
      4lw3 »

Manganese in PDB 4lw3: Crystal Structure of the Drosophila BETA1,4GALACTOSYLTRANSFERASE7 Catalytic Domain D211N Single Mutant Enzyme Complex with Manganese and Udp-Galactose

Enzymatic activity of Crystal Structure of the Drosophila BETA1,4GALACTOSYLTRANSFERASE7 Catalytic Domain D211N Single Mutant Enzyme Complex with Manganese and Udp-Galactose

All present enzymatic activity of Crystal Structure of the Drosophila BETA1,4GALACTOSYLTRANSFERASE7 Catalytic Domain D211N Single Mutant Enzyme Complex with Manganese and Udp-Galactose:
2.4.1.133;

Protein crystallography data

The structure of Crystal Structure of the Drosophila BETA1,4GALACTOSYLTRANSFERASE7 Catalytic Domain D211N Single Mutant Enzyme Complex with Manganese and Udp-Galactose, PDB code: 4lw3 was solved by B.Ramakrishnan, P.K.Qasba, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.91 / 2.00
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 82.087, 82.087, 133.375, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 20.7

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of the Drosophila BETA1,4GALACTOSYLTRANSFERASE7 Catalytic Domain D211N Single Mutant Enzyme Complex with Manganese and Udp-Galactose (pdb code 4lw3). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of the Drosophila BETA1,4GALACTOSYLTRANSFERASE7 Catalytic Domain D211N Single Mutant Enzyme Complex with Manganese and Udp-Galactose, PDB code: 4lw3:

Manganese binding site 1 out of 1 in 4lw3

Go back to Manganese Binding Sites List in 4lw3
Manganese binding site 1 out of 1 in the Crystal Structure of the Drosophila BETA1,4GALACTOSYLTRANSFERASE7 Catalytic Domain D211N Single Mutant Enzyme Complex with Manganese and Udp-Galactose


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of the Drosophila BETA1,4GALACTOSYLTRANSFERASE7 Catalytic Domain D211N Single Mutant Enzyme Complex with Manganese and Udp-Galactose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn401

b:29.1
occ:1.00
 O1B A:GDU402 2.1 28.3 1.0
OD2 A:ASP147 2.2 28.4 1.0
O1A A:GDU402 2.2 26.7 1.0
ND1 A:HIS243 2.3 27.3 1.0
O A:HOH504 2.3 26.3 1.0
NE2 A:HIS241 2.3 28.3 1.0
CE1 A:HIS243 3.2 29.7 1.0
CG A:ASP147 3.2 28.8 1.0
CE1 A:HIS241 3.2 31.8 1.0
CG A:HIS243 3.3 30.4 1.0
CD2 A:HIS241 3.4 27.5 1.0
PB A:GDU402 3.4 27.8 1.0
OD1 A:ASP147 3.4 28.8 1.0
PA A:GDU402 3.5 27.8 1.0
CB A:HIS243 3.6 31.2 1.0
O3A A:GDU402 3.8 28.9 1.0
O3B A:GDU402 4.0 29.8 1.0
NH2 A:ARG250 4.1 26.7 1.0
O3D A:GDU402 4.1 25.1 1.0
O A:HOH564 4.2 27.1 1.0
O A:HOH528 4.2 29.0 1.0
NE2 A:HIS243 4.3 27.4 1.0
O2A A:GDU402 4.3 29.0 1.0
ND1 A:HIS241 4.4 31.3 1.0
CD2 A:HIS243 4.4 29.6 1.0
CG A:HIS241 4.5 29.4 1.0
CB A:ASP147 4.5 30.7 1.0
O2B A:GDU402 4.6 28.6 1.0
O5D A:GDU402 4.7 29.5 1.0
C5D A:GDU402 4.7 25.8 1.0
C3D A:GDU402 4.8 27.8 1.0
OD2 A:ASP145 4.8 27.6 1.0
O A:HOH536 4.9 32.1 1.0

Reference:

Y.Tsutsui, B.Ramakrishnan, P.K.Qasba. Crystal Structures of Beta-1,4-Galactosyltransferase 7 Enzyme Reveal Conformational Changes and Substrate Binding. J.Biol.Chem. V. 288 31963 2013.
ISSN: ISSN 0021-9258
PubMed: 24052259
DOI: 10.1074/JBC.M113.509984
Page generated: Sat Oct 5 20:17:16 2024

Last articles

Mg in 3SF0
Mg in 3SEA
Mg in 3SE1
Mg in 3SE5
Mg in 3SDK
Mg in 3SDV
Mg in 3SDU
Mg in 3SDT
Mg in 3SDR
Mg in 3SBF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy