Manganese in PDB 2rj4: B-Specific Alpha-1,3-Galactosyltransferase \ G176R +Udp+Ada

All present enzymatic activity of B-Specific Alpha-1,3-Galactosyltransferase \ G176R +Udp+Ada:
2.4.1.37;

The structure of B-Specific Alpha-1,3-Galactosyltransferase \ G176R +Udp+Ada, PDB code: 2rj4 was solved by S.V.Evans, J.A.Alfaro, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.95 / 1.47
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	52.480, 149.740, 79.790, 90.00, 90.00, 90.00
R / Rfree (%)	20.6 / 22.6

The binding sites of Manganese atom in the B-Specific Alpha-1,3-Galactosyltransferase \ G176R +Udp+Ada (pdb code 2rj4). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the B-Specific Alpha-1,3-Galactosyltransferase \ G176R +Udp+Ada, PDB code: 2rj4:

Manganese binding site 1 out of 1 in the B-Specific Alpha-1,3-Galactosyltransferase \ G176R +Udp+Ada


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of B-Specific Alpha-1,3-Galactosyltransferase \ G176R +Udp+Ada within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn2 b:20.9 occ:1.00 O3B A:UDP1 2.1 20.0 1.0 O1A A:UDP1 2.2 17.2 1.0 OD2 A:ASP211 2.3 16.7 1.0 OD1 A:ASP213 2.4 16.2 1.0 OD2 A:ASP213 2.6 19.1 1.0 CG A:ASP213 2.8 15.6 1.0 CG A:ASP211 3.3 15.4 1.0 PB A:UDP1 3.3 23.0 1.0 PA A:UDP1 3.4 20.2 1.0 O3A A:UDP1 3.5 19.4 1.0 CB A:ASP211 3.5 11.8 1.0 O3' A:UDP1 3.8 17.9 1.0 O1B A:UDP1 4.0 23.7 1.0 O A:HOH473 4.2 36.3 1.0 NZ A:LYS346 4.3 27.5 1.0 C5' A:UDP1 4.3 18.4 1.0 OD1 A:ASP211 4.4 16.2 1.0 CB A:ASP213 4.4 14.2 1.0 O5' A:UDP1 4.4 17.7 1.0 O2B A:UDP1 4.5 24.6 1.0 O2A A:UDP1 4.5 20.6 1.0 C3' A:UDP1 4.6 18.5 1.0 O A:HOH535 4.7 29.1 1.0 CE A:LYS346 4.9 29.1 1.0 C4' A:UDP1 4.9 18.3 1.0 O A:ASP213 4.9 13.7 1.0 CA A:ASP211 5.0 11.7 1.0

J.A.Alfaro, R.B.Zheng, M.Persson, J.A.Letts, R.Polakowski, Y.Bai, S.N.Borisova, N.O.Seto, T.L.Lowary, M.M.Palcic, S.V.Evans. Abo(H) Blood Group A and B Glycosyltransferases Recognize Substrate Via Specific Conformational Changes. J.Biol.Chem. V. 283 10097 2008.
ISSN: ISSN 0021-9258
PubMed: 18192272
DOI: 10.1074/JBC.M708669200