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Manganese in PDB 2pom: TAB1 with Manganese Ion

Protein crystallography data

The structure of TAB1 with Manganese Ion, PDB code: 2pom was solved by S.C.Lin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.27
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 141.618, 141.618, 66.153, 90.00, 90.00, 120.00
R / Rfree (%) 21.1 / 23.3

Manganese Binding Sites:

The binding sites of Manganese atom in the TAB1 with Manganese Ion (pdb code 2pom). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the TAB1 with Manganese Ion, PDB code: 2pom:

Manganese binding site 1 out of 1 in 2pom

Go back to Manganese Binding Sites List in 2pom
Manganese binding site 1 out of 1 in the TAB1 with Manganese Ion


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of TAB1 with Manganese Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn1001

b:62.5
occ:1.00
OD1 A:ASN69 2.0 35.2 1.0
O A:HOH2007 2.3 38.0 1.0
O A:GLY70 2.4 34.7 1.0
O A:HOH2011 2.4 63.5 1.0
O A:HOH2015 2.7 51.9 1.0
CG A:ASN69 3.2 25.9 1.0
C A:GLY70 3.6 34.8 1.0
ND2 A:ASN69 3.8 29.4 1.0
OE1 A:GLU356 3.9 57.8 1.0
N A:GLY70 4.0 31.1 1.0
O A:HOH2009 4.0 41.6 1.0
O A:HOH2001 4.0 27.6 1.0
OE1 A:GLU50 4.1 64.1 1.0
OD1 A:ASP51 4.2 40.1 1.0
OD2 A:ASP357 4.3 37.2 1.0
C A:ASN69 4.3 30.4 1.0
CA A:GLY70 4.4 38.3 1.0
CB A:ASN69 4.5 29.0 1.0
CB A:GLU50 4.5 34.1 1.0
CD A:GLU356 4.5 70.6 1.0
N A:TYR71 4.6 38.3 1.0
CA A:TYR71 4.7 41.9 1.0
CA A:ASN69 4.7 29.2 1.0
CB A:TYR71 4.8 33.0 1.0
O A:ASN69 4.9 36.7 1.0

Reference:

M.Lu, S.C.Lin, Y.Huang, Y.J.Kang, R.Rich, Y.C.Lo, D.Myszka, J.Han, H.Wu. Xiap Induces Nf-Kappab Activation Via the BIR1/TAB1 Interaction and BIR1 Dimerization. Mol.Cell V. 26 689 2007.
ISSN: ISSN 1097-2765
PubMed: 17560374
DOI: 10.1016/J.MOLCEL.2007.05.006
Page generated: Sat Oct 5 14:57:27 2024

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