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Manganese in PDB 2bpc: Crystal Structure of Rat Dna Polymerase Beta: Evidence For A Common Polymerase Mechanism

Enzymatic activity of Crystal Structure of Rat Dna Polymerase Beta: Evidence For A Common Polymerase Mechanism

All present enzymatic activity of Crystal Structure of Rat Dna Polymerase Beta: Evidence For A Common Polymerase Mechanism:
2.7.7.7;

Protein crystallography data

The structure of Crystal Structure of Rat Dna Polymerase Beta: Evidence For A Common Polymerase Mechanism, PDB code: 2bpc was solved by M.R.Sawaya, H.Pelletier, A.Kumar, S.H.Wilson, J.Kraut, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.80
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 119.807, 62.633, 37.085, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Rat Dna Polymerase Beta: Evidence For A Common Polymerase Mechanism (pdb code 2bpc). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Rat Dna Polymerase Beta: Evidence For A Common Polymerase Mechanism, PDB code: 2bpc:

Manganese binding site 1 out of 1 in 2bpc

Go back to Manganese Binding Sites List in 2bpc
Manganese binding site 1 out of 1 in the Crystal Structure of Rat Dna Polymerase Beta: Evidence For A Common Polymerase Mechanism


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Rat Dna Polymerase Beta: Evidence For A Common Polymerase Mechanism within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn500

b:0.0
occ:1.00
 CG A:ASP190 3.2 21.2 1.0
OD1 A:ASP190 3.2 25.0 1.0
OD2 A:ASP190 3.2 28.1 1.0
OD2 A:ASP256 3.9 1.5 1.0
CG A:ASP256 4.0 7.5 1.0
CB A:ASP190 4.0 11.7 1.0
OD1 A:ASP256 4.2 4.7 1.0
O A:MET191 4.3 5.7 1.0
CB A:ASP256 4.4 8.0 1.0
NH2 A:ARG254 4.4 8.0 1.0
O A:HOH501 4.5 44.6 1.0
OD2 A:ASP192 4.7 22.3 1.0
CG A:ASP192 4.7 17.3 1.0
CB A:ASP192 4.8 7.7 1.0

Reference:

M.R.Sawaya, H.Pelletier, A.Kumar, S.H.Wilson, J.Kraut. Crystal Structure of Rat Dna Polymerase Beta: Evidence For A Common Polymerase Mechanism. Science V. 264 1930 1994.
ISSN: ISSN 0036-8075
PubMed: 7516581
Page generated: Sat Oct 5 13:35:16 2024

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