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Manganese in PDB 2bo6: Dissection of Mannosylglycerate Synthase: An Archetypal Mannosyltransferase

Protein crystallography data

The structure of Dissection of Mannosylglycerate Synthase: An Archetypal Mannosyltransferase, PDB code: 2bo6 was solved by J.Flint, E.Taylor, M.Yang, D.N.Bolam, L.E.Tailford, C.Martinez-Fleites, E.J.Dodson, B.G.Davis, H.J.Gilbert, G.J.Davies, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.99 / 2.45
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 150.228, 150.228, 154.285, 90.00, 90.00, 120.00
R / Rfree (%) 25.3 / 27.7

Manganese Binding Sites:

The binding sites of Manganese atom in the Dissection of Mannosylglycerate Synthase: An Archetypal Mannosyltransferase (pdb code 2bo6). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Dissection of Mannosylglycerate Synthase: An Archetypal Mannosyltransferase, PDB code: 2bo6:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in 2bo6

Go back to Manganese Binding Sites List in 2bo6
Manganese binding site 1 out of 2 in the Dissection of Mannosylglycerate Synthase: An Archetypal Mannosyltransferase


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Dissection of Mannosylglycerate Synthase: An Archetypal Mannosyltransferase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn1383

b:47.9
occ:1.00
OD2 A:ASP102 2.2 30.7 1.0
CG A:ASP102 3.0 31.8 1.0
OD1 A:ASP102 3.1 33.7 1.0
OD2 A:ASP100 4.1 37.2 1.0
NZ A:LYS215 4.2 32.7 1.0
CB A:ASP102 4.4 30.9 1.0

Manganese binding site 2 out of 2 in 2bo6

Go back to Manganese Binding Sites List in 2bo6
Manganese binding site 2 out of 2 in the Dissection of Mannosylglycerate Synthase: An Archetypal Mannosyltransferase


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Dissection of Mannosylglycerate Synthase: An Archetypal Mannosyltransferase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn1383

b:50.4
occ:1.00
OD2 B:ASP102 2.1 27.1 1.0
CG B:ASP102 2.8 30.2 1.0
OD1 B:ASP102 2.8 32.2 1.0
OD2 B:ASP100 2.9 33.0 1.0
CG B:ASP100 4.1 31.9 1.0
CB B:ASP102 4.1 30.2 1.0
CB B:ASP100 4.7 30.0 1.0
OE2 B:GLU11 4.9 31.1 1.0

Reference:

J.Flint, E.Taylor, M.Yang, D.N.Bolam, L.E.Tailford, C.Martinez-Fleites, E.J.Dodson, B.G.Davis, H.J.Gilbert, G.J.Davies. Structural Dissection and High-Throughput Screening of Mannosylglyceerate Synthase Nat.Struct.Mol.Biol. V. 12 608 2005.
ISSN: ISSN 1545-9993
PubMed: 15951819
DOI: 10.1038/NSMB950
Page generated: Sat Oct 5 13:34:31 2024

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