Atomistry » Manganese » PDB 1yw7-2a2t » 1zco
Atomistry »
  Manganese »
    PDB 1yw7-2a2t »
      1zco »

Manganese in PDB 1zco: Crystal Structure of Pyrococcus Furiosus 3-Deoxy-D-Arabino- Heptulosonate 7-Phosphate Synthase

Enzymatic activity of Crystal Structure of Pyrococcus Furiosus 3-Deoxy-D-Arabino- Heptulosonate 7-Phosphate Synthase

All present enzymatic activity of Crystal Structure of Pyrococcus Furiosus 3-Deoxy-D-Arabino- Heptulosonate 7-Phosphate Synthase:
4.1.2.15;

Protein crystallography data

The structure of Crystal Structure of Pyrococcus Furiosus 3-Deoxy-D-Arabino- Heptulosonate 7-Phosphate Synthase, PDB code: 1zco was solved by L.R.Schofield, B.F.Anderson, M.L.Patchett, G.E.Norris, G.B.Jameson, E.J.Parker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.80 / 2.25
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 87.231, 110.024, 144.350, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 23.1

Other elements in 1zco:

The structure of Crystal Structure of Pyrococcus Furiosus 3-Deoxy-D-Arabino- Heptulosonate 7-Phosphate Synthase also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Pyrococcus Furiosus 3-Deoxy-D-Arabino- Heptulosonate 7-Phosphate Synthase (pdb code 1zco). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Pyrococcus Furiosus 3-Deoxy-D-Arabino- Heptulosonate 7-Phosphate Synthase, PDB code: 1zco:

Manganese binding site 1 out of 1 in 1zco

Go back to Manganese Binding Sites List in 1zco
Manganese binding site 1 out of 1 in the Crystal Structure of Pyrococcus Furiosus 3-Deoxy-D-Arabino- Heptulosonate 7-Phosphate Synthase


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Pyrococcus Furiosus 3-Deoxy-D-Arabino- Heptulosonate 7-Phosphate Synthase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn900

b:36.5
occ:0.25
 OE2 B:GLU227 2.0 41.3 1.0
SG B:CYS31 2.1 38.0 1.0
NE2 B:HIS201 2.7 54.0 1.0
OD2 B:ASP238 2.7 66.9 1.0
CE1 B:HIS201 3.0 53.5 1.0
CB B:CYS31 3.1 34.3 1.0
CD B:GLU227 3.2 33.8 1.0
CG B:ASP238 3.6 58.3 1.0
O B:HOH2011 3.6 57.4 1.0
NZ B:LYS60 3.8 42.5 0.3
CA B:CYS31 3.8 32.6 1.0
CD2 B:HIS201 3.9 51.8 1.0
OE1 B:GLU227 3.9 37.1 1.0
CE B:LYS60 4.2 44.6 0.3
ND1 B:HIS201 4.2 50.9 1.0
OD1 B:ASP238 4.3 61.0 1.0
C3 B:PEP1901 4.3 34.4 0.5
CG B:GLU227 4.3 29.8 1.0
CB B:ASP238 4.3 52.8 1.0
NZ B:LYS60 4.4 45.1 0.4
CE B:LYS60 4.4 46.1 0.4
NE2 B:GLN241 4.4 54.3 1.0
C2 B:PEP1901 4.4 34.2 0.5
O1 B:PEP1901 4.4 26.8 0.5
C1 B:PEP1901 4.4 33.2 0.5
NH2 B:ARG55 4.6 44.8 1.0
CG B:HIS201 4.7 41.8 1.0
C B:CYS31 4.7 32.4 1.0
N B:CYS31 4.9 32.2 1.0
O B:CYS31 4.9 33.7 1.0
O2' B:PEP1901 5.0 27.3 0.5

Reference:

L.R.Schofield, B.F.Anderson, M.L.Patchett, G.E.Norris, G.B.Jameson, E.J.Parker. Substrate Ambiguity and Crystal Structure of Pyrococcus Furiosus 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase: An Ancestral 3-Deoxyald-2-Ulosonate-Phosphate Synthase?(,) Biochemistry V. 44 11950 2005.
ISSN: ISSN 0006-2960
PubMed: 16142893
DOI: 10.1021/BI050577Z
Page generated: Sat Oct 5 13:16:28 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy