Manganese in PDB 1xij: Modes of Binding Substrates and Their Analogues to the Enzyme D-Xylose Isomerase

All present enzymatic activity of Modes of Binding Substrates and Their Analogues to the Enzyme D-Xylose Isomerase:
5.3.1.5;

The structure of Modes of Binding Substrates and Their Analogues to the Enzyme D-Xylose Isomerase, PDB code: 1xij was solved by H.L.Carrell, J.P.Glusker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 1.70
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	93.880, 99.680, 102.900, 90.00, 90.00, 90.00
R / Rfree (%)	n/a / n/a

The binding sites of Manganese atom in the Modes of Binding Substrates and Their Analogues to the Enzyme D-Xylose Isomerase (pdb code 1xij). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Modes of Binding Substrates and Their Analogues to the Enzyme D-Xylose Isomerase, PDB code: 1xij:

Manganese binding site 1 out of 1 in the Modes of Binding Substrates and Their Analogues to the Enzyme D-Xylose Isomerase


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Modes of Binding Substrates and Their Analogues to the Enzyme D-Xylose Isomerase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn391 b:5.8 occ:0.80 OE2 A:GLU181 2.2 7.4 1.0 OD2 A:ASP287 2.2 5.5 1.0 OE1 A:GLU217 2.3 3.5 1.0 O4 A:THE389 2.3 10.7 1.0 OD2 A:ASP245 2.3 4.3 1.0 O2 A:THE389 2.3 8.8 1.0 CD A:GLU181 3.1 4.2 1.0 C4 A:THE389 3.2 15.2 1.0 CG A:ASP287 3.3 2.5 1.0 C2 A:THE389 3.3 11.8 1.0 CD A:GLU217 3.4 2.5 1.0 OE1 A:GLU181 3.4 3.5 1.0 CG A:ASP245 3.5 5.0 1.0 C3 A:THE389 3.6 11.1 1.0 O3 A:THE389 3.8 11.9 1.0 CB A:ASP287 3.8 3.8 1.0 O A:HOH409 3.9 11.2 1.0 O A:HOH408 3.9 7.7 1.0 CE1 A:HIS220 4.0 3.9 1.0 CB A:ASP245 4.0 2.5 1.0 CB A:GLU217 4.1 2.5 1.0 O5 A:THE389 4.1 18.3 1.0 OE2 A:GLU217 4.2 11.1 1.0 CG A:GLU217 4.2 2.5 1.0 NE2 A:HIS220 4.3 4.9 1.0 OD1 A:ASP287 4.3 2.6 1.0 OD1 A:ASP245 4.4 2.5 1.0 CG A:GLU181 4.5 2.5 1.0 C1 A:THE389 4.6 7.0 1.0 ND1 A:HIS220 4.7 4.1 1.0

H.L.Carrell, H.Hoier, J.P.Glusker. Modes of Binding Substrates and Their Analogues to the Enzyme D-Xylose Isomerase. Acta Crystallogr.,Sect.D V. 50 113 1994.
ISSN: ISSN 0907-4449
PubMed: 15299449
DOI: 10.1107/S0907444993009345