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Manganese in PDB 9kqc: Chlorella Virus Hyaluronan Synthase Bound to Vnar

Manganese Binding Sites:

The binding sites of Manganese atom in the Chlorella Virus Hyaluronan Synthase Bound to Vnar (pdb code 9kqc). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Chlorella Virus Hyaluronan Synthase Bound to Vnar, PDB code: 9kqc:

Manganese binding site 1 out of 1 in 9kqc

Go back to Manganese Binding Sites List in 9kqc
Manganese binding site 1 out of 1 in the Chlorella Virus Hyaluronan Synthase Bound to Vnar


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Chlorella Virus Hyaluronan Synthase Bound to Vnar within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn602

b:427.2
occ:1.00
OE2 A:GLU93 2.2 220.0 1.0
OD2 A:ASP203 2.4 209.4 1.0
CD A:GLU93 2.9 220.0 1.0
CB A:ASP203 3.0 209.4 1.0
OE1 A:GLU93 3.0 220.0 1.0
CG A:ASP203 3.1 209.4 1.0
OD1 A:ASP327 3.8 182.8 1.0
OD1 A:ASP203 4.3 209.4 1.0
CG A:GLU93 4.3 220.0 1.0
CA A:ASP203 4.4 209.4 1.0
CG A:ASP327 4.8 182.8 1.0
O3A A:UD1601 4.8 247.8 1.0
O2B A:UD1601 4.9 247.8 1.0
N A:ASP203 5.0 209.4 1.0

Reference:

P.Deng, X.Zhang, J.Wen, M.Xu, P.Li, H.Wang, Y.Bi. Generation of Shark Single-Domain Antibodies As An Aid For Cryo-Em Structure Determination of Membrane Proteins: Use Hyaluronan Synthase As An Example. J Struct Biol X 2025.
ISSN: ESSN 2590-1524
DOI: 10.1016/J.YJSBX.2025.100126
Page generated: Sun Aug 17 02:39:25 2025

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