Atomistry » Manganese » PDB 9jh8-9xim » 9koq
Atomistry »
  Manganese »
    PDB 9jh8-9xim »
      9koq »

Manganese in PDB 9koq: Crystal Structure of An Arylsulfatase From Enterococcus Faecium

Protein crystallography data

The structure of Crystal Structure of An Arylsulfatase From Enterococcus Faecium, PDB code: 9koq was solved by L.Guo, Y.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.93 / 1.96
Space group P 4 21 2
Cell size a, b, c (Å), α, β, γ (°) 151.594, 151.594, 97.176, 90, 90, 90
R / Rfree (%) 15.7 / 17.7

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of An Arylsulfatase From Enterococcus Faecium (pdb code 9koq). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Crystal Structure of An Arylsulfatase From Enterococcus Faecium, PDB code: 9koq:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in 9koq

Go back to Manganese Binding Sites List in 9koq
Manganese binding site 1 out of 2 in the Crystal Structure of An Arylsulfatase From Enterococcus Faecium


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of An Arylsulfatase From Enterococcus Faecium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn501

b:25.1
occ:1.00
SG A:ALS61 2.1 33.4 0.6
OD2 A:ASP311 2.1 23.7 1.0
OD1 A:ASP20 2.1 22.5 1.0
NE2 A:HIS312 2.2 23.9 1.0
OS1 A:ALS61 2.3 31.0 0.4
OD2 A:ASP20 2.7 27.7 1.0
CG A:ASP20 2.7 23.6 1.0
CG A:ASP311 2.9 21.3 1.0
CD2 A:HIS312 3.0 22.6 1.0
OD1 A:ASP311 3.1 20.1 1.0
CB A:ALS61 3.1 26.4 0.4
CE1 A:HIS312 3.1 22.3 1.0
OS2 A:ALS61 3.1 34.1 0.4
CB A:ALS61 3.2 26.5 0.6
OG A:ALS61 3.4 21.5 0.4
CA A:ALS61 3.4 23.9 0.4
CA A:ALS61 3.4 23.6 0.6
S A:ALS61 3.4 36.3 0.4
N A:ALS61 3.8 24.5 0.4
N A:ALS61 3.9 24.3 0.6
CB A:ASP20 4.1 21.7 1.0
CG A:HIS312 4.2 21.3 1.0
ND1 A:HIS312 4.2 20.9 1.0
NZ A:LYS110 4.2 30.5 1.0
OS4 A:ALS61 4.2 31.6 0.4
OS3 A:ALS61 4.3 31.4 0.4
CB A:ASP311 4.3 19.4 1.0
CD2 A:HIS220 4.4 29.7 1.0
N A:GLN21 4.4 20.9 1.0
NE A:ARG65 4.4 21.6 1.0
CA A:ASP20 4.5 20.6 1.0
NH2 A:ARG65 4.5 21.8 1.0
OE1 A:GLN21 4.6 25.3 1.0
C A:SER60 4.7 25.5 1.0
C A:ASP20 4.7 19.0 1.0
C A:ALS61 4.8 24.8 0.6
C A:ALS61 4.8 24.7 0.4
CE A:LYS324 4.9 30.1 1.0
CZ A:ARG65 5.0 22.9 1.0
CB A:GLN21 5.0 21.3 1.0

Manganese binding site 2 out of 2 in 9koq

Go back to Manganese Binding Sites List in 9koq
Manganese binding site 2 out of 2 in the Crystal Structure of An Arylsulfatase From Enterococcus Faecium


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure of An Arylsulfatase From Enterococcus Faecium within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn501

b:27.0
occ:1.00
OS1 B:ALS61 1.9 32.2 0.4
OD2 B:ASP311 2.1 25.0 1.0
OD1 B:ASP20 2.1 28.9 1.0
NE2 B:HIS312 2.2 26.2 1.0
SG B:ALS61 2.3 40.0 0.6
OD2 B:ASP20 2.6 26.5 1.0
CG B:ASP20 2.6 25.8 1.0
CB B:ALS61 2.9 28.7 0.4
CG B:ASP311 2.9 22.3 1.0
CD2 B:HIS312 3.0 24.6 1.0
S B:ALS61 3.0 45.7 0.4
OD1 B:ASP311 3.1 23.2 1.0
OS4 B:ALS61 3.2 37.5 0.4
CE1 B:HIS312 3.2 25.6 1.0
CB B:ALS61 3.2 28.8 0.6
CA B:ALS61 3.3 27.2 0.4
OG B:ALS61 3.3 21.7 0.4
CA B:ALS61 3.4 27.1 0.6
OS2 B:ALS61 3.7 31.6 0.4
N B:ALS61 3.8 26.0 0.4
N B:ALS61 3.8 26.0 0.6
OS3 B:ALS61 4.0 33.3 0.4
CB B:ASP20 4.1 24.0 1.0
NZ B:LYS110 4.1 32.4 1.0
CG B:HIS312 4.1 24.7 1.0
ND1 B:HIS312 4.2 22.7 1.0
CD2 B:HIS220 4.2 32.9 1.0
CB B:ASP311 4.3 22.8 1.0
N B:GLN21 4.4 22.2 1.0
NE B:ARG65 4.5 24.5 1.0
CA B:ASP20 4.5 24.0 1.0
NH2 B:ARG65 4.5 21.9 1.0
OE1 B:GLN21 4.7 28.1 1.0
C B:SER60 4.7 24.7 1.0
C B:ALS61 4.7 25.8 0.4
C B:ASP20 4.7 22.7 1.0
C B:ALS61 4.7 25.8 0.6
CE B:LYS324 4.9 29.0 1.0
CB B:GLN21 5.0 25.2 1.0

Reference:

L.Guo, Y.Huang. Crystal Structure of An Arylsulfatase From Enterococcus Faecium To Be Published.
Page generated: Sun Aug 17 02:39:20 2025

Last articles

Na in 4JII
Na in 4JHH
Na in 4JHI
Na in 4JF0
Na in 4JG6
Na in 4JG7
Na in 4JGA
Na in 4JEZ
Na in 4JEV
Na in 4JEX
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy