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Manganese in PDB 9koj: Crystal Structure of the Isomerase ART22

Protein crystallography data

The structure of Crystal Structure of the Isomerase ART22, PDB code: 9koj was solved by L.Guo, P.W.Li, D.F.Li, Y.H.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.60 / 1.45
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 46.46, 78.005, 150.398, 90, 90, 90
R / Rfree (%) 17.8 / 20.3

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of the Isomerase ART22 (pdb code 9koj). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Crystal Structure of the Isomerase ART22, PDB code: 9koj:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in 9koj

Go back to Manganese Binding Sites List in 9koj
Manganese binding site 1 out of 2 in the Crystal Structure of the Isomerase ART22


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of the Isomerase ART22 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn301

b:16.7
occ:1.00
OE1 A:GLU144 2.0 21.8 1.0
OD2 A:ASP174 2.2 18.4 1.0
OE1 A:GLU252 2.2 20.9 1.0
O A:HOH540 2.3 19.8 1.0
ND1 A:HIS200 2.3 14.8 1.0
O A:HOH420 2.3 29.6 1.0
CD A:GLU144 3.1 21.8 1.0
CE1 A:HIS200 3.2 13.7 1.0
CD A:GLU252 3.2 21.9 1.0
CG A:ASP174 3.3 15.9 1.0
CG A:HIS200 3.3 13.6 1.0
OE2 A:GLU252 3.5 27.2 1.0
OE2 A:GLU144 3.6 25.1 1.0
CB A:HIS200 3.7 13.8 1.0
CB A:ASP174 3.8 15.3 1.0
NZ A:LYS202 4.2 20.8 1.0
NE2 A:HIS200 4.3 14.6 1.0
CG A:GLU144 4.3 21.1 1.0
O A:HOH466 4.3 40.5 1.0
OD1 A:ASP174 4.3 16.2 1.0
CD2 A:HIS200 4.4 14.5 1.0
CE A:MET6 4.5 19.8 1.0
ND2 A:ASN177 4.5 16.6 1.0
CG A:GLU252 4.6 17.6 1.0
SD A:MET6 4.7 19.8 1.0
CA A:ASP174 4.9 13.4 1.0

Manganese binding site 2 out of 2 in 9koj

Go back to Manganese Binding Sites List in 9koj
Manganese binding site 2 out of 2 in the Crystal Structure of the Isomerase ART22


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure of the Isomerase ART22 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn301

b:16.7
occ:1.00
OE1 B:GLU144 2.0 24.4 1.0
OD2 B:ASP174 2.2 19.0 1.0
OE1 B:GLU252 2.2 22.3 1.0
O B:HOH416 2.2 33.5 1.0
O B:HOH549 2.3 20.9 1.0
ND1 B:HIS200 2.3 14.6 1.0
CD B:GLU144 3.1 24.1 1.0
CD B:GLU252 3.1 23.1 1.0
CE1 B:HIS200 3.2 13.2 1.0
CG B:ASP174 3.3 16.4 1.0
OE2 B:GLU252 3.3 27.1 1.0
CG B:HIS200 3.4 13.2 1.0
OE2 B:GLU144 3.6 27.3 1.0
CB B:HIS200 3.7 14.4 1.0
CB B:ASP174 3.8 14.9 1.0
NZ B:LYS202 4.2 22.2 1.0
CG B:GLU144 4.3 23.3 1.0
OD1 B:ASP174 4.3 15.9 1.0
NE2 B:HIS200 4.4 12.3 1.0
CD2 B:HIS200 4.5 12.0 1.0
CG B:GLU252 4.5 18.2 1.0
ND2 B:ASN177 4.5 16.1 1.0
CE B:MET6 4.6 19.4 1.0
SD B:MET6 4.7 20.3 1.0
CA B:ASP174 4.9 13.5 1.0

Reference:

L.Guo, P.W.Li, D.F.Li, Y.H.Chen. Crystal Structure of the Isomerase ART22 To Be Published.
Page generated: Sun Aug 17 02:39:16 2025

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