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Manganese in PDB 9cks: Human G Protein-Coupled Receptor Kinase 5-D311N in Complex with Atp and Manganese Ion

Protein crystallography data

The structure of Human G Protein-Coupled Receptor Kinase 5-D311N in Complex with Atp and Manganese Ion, PDB code: 9cks was solved by Y.Chen, J.J.G.Tesmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.56 / 3.08
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 137.825, 137.825, 71.289, 90, 90, 90
R / Rfree (%) 22.3 / 28

Manganese Binding Sites:

The binding sites of Manganese atom in the Human G Protein-Coupled Receptor Kinase 5-D311N in Complex with Atp and Manganese Ion (pdb code 9cks). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Human G Protein-Coupled Receptor Kinase 5-D311N in Complex with Atp and Manganese Ion, PDB code: 9cks:

Manganese binding site 1 out of 1 in 9cks

Go back to Manganese Binding Sites List in 9cks
Manganese binding site 1 out of 1 in the Human G Protein-Coupled Receptor Kinase 5-D311N in Complex with Atp and Manganese Ion


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Human G Protein-Coupled Receptor Kinase 5-D311N in Complex with Atp and Manganese Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn602

b:287.2
occ:1.00
O2G A:ATP603 2.1 187.1 1.0
O1A A:ATP603 2.1 194.2 1.0
O3A A:ATP603 2.2 205.0 1.0
OD2 A:ASP329 2.5 154.2 1.0
PA A:ATP603 2.6 206.2 1.0
PB A:ATP603 2.7 206.2 1.0
O3B A:ATP603 2.7 198.2 1.0
PG A:ATP603 2.8 197.8 1.0
CG A:ASP329 2.9 130.7 1.0
O1B A:ATP603 3.1 204.5 1.0
OD1 A:ASP329 3.2 126.2 1.0
O2A A:ATP603 3.3 182.8 1.0
HB2 A:ASP329 3.6 136.4 1.0
O3G A:ATP603 3.6 171.1 1.0
CB A:ASP329 3.8 113.5 1.0
HA A:ASP329 3.9 119.5 1.0
O5' A:ATP603 4.0 197.6 1.0
O1G A:ATP603 4.1 201.2 1.0
O2B A:ATP603 4.2 191.3 1.0
CA A:ASP329 4.4 99.5 1.0
HZ1 A:LYS215 4.4 147.8 1.0
H3' A:ATP603 4.5 208.8 1.0
HB3 A:ASP329 4.6 136.4 1.0
H5'2 A:ATP603 4.7 225.8 1.0
HO3' A:ATP603 4.8 235.8 1.0
HZ3 A:LYS215 4.9 147.8 1.0
C5' A:ATP603 5.0 188.1 1.0
O3' A:ATP603 5.0 196.4 1.0

Reference:

Y.Chen, J.J.G.Tesmer. Structures of G Protein-Coupled Receptor Kinase 5 in Multiple Conformations Reveals Mechanism of Activation and Inhibition To Be Published.
Page generated: Sun Aug 17 02:24:10 2025

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