Manganese in PDB 9ca0: Human TOP3B-TDRD3 Core Complex in Dna Pre-Cleavage State

All present enzymatic activity of Human TOP3B-TDRD3 Core Complex in Dna Pre-Cleavage State:
5.6.2.1;

The binding sites of Manganese atom in the Human TOP3B-TDRD3 Core Complex in Dna Pre-Cleavage State (pdb code 9ca0). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Human TOP3B-TDRD3 Core Complex in Dna Pre-Cleavage State, PDB code: 9ca0:

Manganese binding site 1 out of 1 in the Human TOP3B-TDRD3 Core Complex in Dna Pre-Cleavage State


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Human TOP3B-TDRD3 Core Complex in Dna Pre-Cleavage State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn701 b:68.0 occ:1.00 OD2 A:ASP119 2.1 70.4 1.0 CG A:ASP119 2.9 70.4 1.0 OD1 A:ASP119 3.1 70.4 1.0 OD2 A:ASP117 3.3 69.5 1.0 CB A:ASP117 4.0 69.5 1.0 CG A:ASP117 4.1 69.5 1.0 CB A:ASP119 4.4 70.4 1.0 C5' D:DA4 4.5 64.6 1.0 O3' D:DA4 4.5 64.6 1.0 OE2 A:GLU9 4.5 69.5 1.0 O A:LYS120 4.6 69.5 1.0 OD1 A:ASP386 4.7 69.5 1.0 C4' D:DA4 4.9 64.6 1.0

X.Yang, X.Chen, W.Yang, Y.Pommier. Structural Insights Into Human Topoisomerase 3-Beta Dna and Rna Catalytic Cycles and Topo-Gate Dynamics To Be Published.