Manganese in PDB 8rc4: Structure of Integrator-PP2A Complex

The structure of Structure of Integrator-PP2A Complex also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Manganese atom in the Structure of Integrator-PP2A Complex (pdb code 8rc4). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Structure of Integrator-PP2A Complex, PDB code: 8rc4:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the Structure of Integrator-PP2A Complex


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structure of Integrator-PP2A Complex within 5.0Å range: probe atom residue distance (Å) B Occ q:Mn1001 b:139.3 occ:1.00 OD2 q:ASP85 2.1 107.7 1.0 OD2 q:ASP57 2.2 98.8 1.0 NE2 q:HIS59 2.5 101.9 1.0 MN q:MN1002 2.6 122.0 1.0 CG q:ASP85 3.3 104.9 1.0 CG q:ASP57 3.4 99.4 1.0 CD2 q:HIS59 3.4 98.6 1.0 CE1 q:HIS59 3.6 106.5 1.0 CB q:ASP85 4.1 103.2 1.0 NE2 q:HIS118 4.1 96.7 1.0 OH q:TYR265 4.2 115.1 1.0 CD2 q:HIS118 4.2 99.6 1.0 ND1 q:HIS241 4.2 74.6 1.0 OD1 q:ASP57 4.2 104.6 1.0 CA q:HIS241 4.3 68.2 1.0 OD1 q:ASP85 4.3 106.7 1.0 O q:HIS241 4.3 81.2 1.0 CB q:ASP57 4.3 98.7 1.0 OD1 q:ASN117 4.4 89.7 1.0 C q:HIS241 4.5 75.3 1.0 CE1 q:HIS167 4.5 72.0 1.0 NE2 q:HIS167 4.5 74.6 1.0 CE1 q:PHE260 4.6 92.3 1.0 CG q:HIS59 4.6 102.0 1.0 ND1 q:HIS59 4.7 109.9 1.0 CZ q:TYR265 4.9 118.4 1.0 CE1 q:HIS241 5.0 75.2 1.0

Manganese binding site 2 out of 2 in the Structure of Integrator-PP2A Complex


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Structure of Integrator-PP2A Complex within 5.0Å range: probe atom residue distance (Å) B Occ q:Mn1002 b:122.0 occ:1.00 OD1 q:ASN117 2.1 89.7 1.0 ND1 q:HIS241 2.2 74.6 1.0 NE2 q:HIS167 2.3 74.6 1.0 OD2 q:ASP85 2.4 107.7 1.0 MN q:MN1001 2.6 139.3 1.0 CE1 q:HIS167 2.9 72.0 1.0 CG q:ASP85 3.1 104.9 1.0 CE1 q:HIS241 3.1 75.2 1.0 CG q:ASN117 3.2 88.4 1.0 CG q:HIS241 3.3 70.6 1.0 OD1 q:ASP85 3.3 106.7 1.0 CD2 q:HIS167 3.5 80.4 1.0 CA q:HIS241 3.5 68.2 1.0 OD2 q:ASP57 3.6 98.8 1.0 ND2 q:ASN117 3.7 90.7 1.0 CB q:HIS241 3.7 67.3 1.0 CD2 q:HIS118 4.1 99.6 1.0 O q:HIS241 4.1 81.2 1.0 ND1 q:HIS167 4.1 67.3 1.0 NE2 q:HIS241 4.2 73.3 1.0 CB q:ASP85 4.2 103.2 1.0 C q:HIS241 4.3 75.3 1.0 CD2 q:HIS241 4.3 71.1 1.0 CG q:HIS167 4.4 73.0 1.0 CG q:ASP57 4.4 99.4 1.0 N q:HIS241 4.5 64.1 1.0 CB q:ASN117 4.5 83.5 1.0 N q:ASN117 4.5 81.0 1.0 OD1 q:ASP57 4.5 104.6 1.0 NE2 q:HIS118 4.6 96.7 1.0 NE2 q:HIS59 4.6 101.9 1.0 O q:LEU199 4.9 79.5 1.0

I.Fianu, M.Ochmann, J.L.Walshe, O.Dybkov, J.N.Cruz, H.Urlaub, P.Cramer. Structural Basis of Integrator-Dependent Rna Polymerase II Termination To Be Published.