Manganese in PDB 8pq7: The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C).

The structure of The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C)., PDB code: 8pq7 was solved by A.R.Bentham, M.J.Banfield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	58.62 / 2.10
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	55.492, 57.036, 59.015, 84.35, 86.49, 89.85
R / Rfree (%)	20.2 / 25.1

The binding sites of Manganese atom in the The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C). (pdb code 8pq7). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 4 binding sites of Manganese where determined in the The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C)., PDB code: 8pq7:
Jump to Manganese binding site number: 1; 2; 3; 4;

Manganese binding site 1 out of 4 in the The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C).


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C). within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn301 b:103.7 occ:1.00 CD2 A:HIS246 2.5 29.6 1.0 OD2 A:ASP90 2.7 33.6 1.0 O A:HOH468 2.9 17.8 1.0 OD1 A:ASN122 3.0 21.0 1.0 O A:HIS246 3.1 33.2 1.0 NE2 A:HIS171 3.3 14.8 1.0 MN A:MN302 3.3 83.3 1.0 NE2 A:HIS246 3.4 33.2 1.0 CA A:HIS246 3.5 22.9 1.0 CG A:HIS246 3.5 26.6 1.0 C A:HIS246 3.6 27.4 1.0 O A:HOH453 3.7 42.6 1.0 OD2 A:ASP62 3.7 25.5 1.0 CG A:ASN122 3.8 23.1 1.0 CE1 A:HIS171 3.9 15.8 1.0 CG A:ASP90 3.9 26.6 1.0 CB A:HIS246 3.9 23.4 1.0 CE1 A:HIS123 4.0 26.3 1.0 ND1 A:HIS123 4.0 26.7 1.0 ND2 A:ASN122 4.0 22.8 1.0 CD2 A:HIS171 4.4 14.3 1.0 OD1 A:ASP90 4.4 22.6 1.0 NH2 A:ARG219 4.5 36.5 1.0 CE1 A:HIS246 4.6 30.1 1.0 NE2 A:HIS64 4.6 28.6 1.0 ND1 A:HIS246 4.6 25.0 1.0 N A:HIS246 4.7 20.7 1.0 CG A:ASP62 4.8 22.6 1.0 N A:GLN247 4.9 25.1 1.0 NH1 A:ARG219 5.0 26.8 1.0

Manganese binding site 2 out of 4 in the The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C).


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C). within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn302 b:83.3 occ:1.00 O A:HOH453 2.9 42.6 1.0 NE2 A:HIS64 3.0 28.6 1.0 OD2 A:ASP62 3.0 25.5 1.0 MN A:MN301 3.3 103.7 1.0 CD2 A:HIS64 3.5 28.1 1.0 O A:HIS246 3.7 33.2 1.0 CE2 A:PHE265 3.8 28.2 1.0 OH A:TYR270 3.9 33.3 1.0 O A:HOH468 4.0 17.8 1.0 OD2 A:ASP90 4.0 33.6 1.0 CG A:ASP62 4.1 22.6 1.0 CE1 A:HIS64 4.2 28.8 1.0 C A:HIS246 4.2 27.4 1.0 CZ A:TYR270 4.3 32.4 1.0 CE2 A:TYR270 4.5 31.2 1.0 O A:HOH404 4.5 32.5 1.0 CZ A:PHE265 4.5 31.4 1.0 CB A:ASP62 4.7 23.8 1.0 CD2 A:PHE265 4.7 25.3 1.0 CE1 A:HIS123 4.8 26.3 1.0 CG A:HIS64 4.8 30.5 1.0 CA A:HIS246 4.8 22.9 1.0 N A:GLN247 4.9 25.1 1.0

Manganese binding site 3 out of 4 in the The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C).


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 3 of The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C). within 5.0Å range: probe atom residue distance (Å) B Occ C:Mn301 b:78.8 occ:1.00 OD2 C:ASP62 3.0 29.8 1.0 MN C:MN302 3.1 93.4 1.0 NE2 C:HIS64 3.1 37.8 1.0 CD2 C:HIS64 3.6 36.3 1.0 O C:HIS246 3.7 27.3 1.0 CE2 C:PHE265 3.8 27.7 1.0 OH C:TYR270 3.9 40.1 1.0 OD2 C:ASP90 4.0 33.0 1.0 CG C:ASP62 4.1 25.9 1.0 C C:HIS246 4.2 23.6 1.0 CE1 C:HIS64 4.3 37.0 1.0 CZ C:TYR270 4.3 39.3 1.0 O C:HOH464 4.4 24.9 1.0 CE2 C:TYR270 4.5 38.3 1.0 CZ C:PHE265 4.6 27.7 1.0 CB C:ASP62 4.7 26.5 1.0 CD2 C:PHE265 4.7 26.0 1.0 CA C:HIS246 4.8 22.2 1.0 CE1 C:HIS123 4.9 28.4 1.0 CG C:HIS64 4.9 37.6 1.0 O C:HOH450 4.9 39.2 1.0 N C:GLN247 4.9 23.8 1.0

Manganese binding site 4 out of 4 in the The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C).


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 4 of The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PI04134 in Complex with Potato Protein Phosphatase Type 1C (PP1C). within 5.0Å range: probe atom residue distance (Å) B Occ C:Mn302 b:93.4 occ:1.00 OD2 C:ASP90 2.5 33.0 1.0 ND1 C:HIS246 2.8 21.9 1.0 OD1 C:ASN122 2.9 24.5 1.0 MN C:MN301 3.1 78.8 1.0 O C:HOH464 3.1 24.9 1.0 O C:HIS246 3.3 27.3 1.0 NE2 C:HIS171 3.4 19.9 1.0 OD2 C:ASP62 3.6 29.8 1.0 CE1 C:HIS246 3.6 22.0 1.0 CG C:ASP90 3.7 26.5 1.0 CA C:HIS246 3.7 22.2 1.0 CE1 C:HIS123 3.8 28.4 1.0 ND1 C:HIS123 3.8 28.6 1.0 CG C:HIS246 3.8 20.6 1.0 CG C:ASN122 3.8 24.1 1.0 CE1 C:HIS171 3.9 20.6 1.0 C C:HIS246 3.9 23.6 1.0 ND2 C:ASN122 4.0 22.4 1.0 CB C:HIS246 4.2 21.5 1.0 OD1 C:ASP90 4.3 24.3 1.0 NE2 C:HIS64 4.3 37.8 1.0 CD2 C:HIS171 4.6 20.4 1.0 NH2 C:ARG219 4.7 28.9 1.0 CG C:ASP62 4.7 25.9 1.0 CB C:ASP90 4.8 27.4 1.0 NE2 C:HIS246 4.8 21.1 1.0 N C:HIS246 4.9 20.6 1.0 CE1 C:HIS64 4.9 37.0 1.0 CD2 C:HIS246 4.9 19.4 1.0

A.R.Bentham, W.Wang, F.A.Varden, F.Trusch, P.R.J.Birch, M.J.Banfield. The Potato Late Blight Pathogen (Phytophthora Infestans) Effector Protein PEXRD54 in Complex with Potato Protein Phosphatase Type 1C (PP1C). To Be Published.