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Manganese in PDB 8k62: Crystal Structure of ALKBH1 and 13H Complex.

Enzymatic activity of Crystal Structure of ALKBH1 and 13H Complex.

All present enzymatic activity of Crystal Structure of ALKBH1 and 13H Complex.:
1.14.11.33; 1.14.11.51; 4.2.99.18;

Protein crystallography data

The structure of Crystal Structure of ALKBH1 and 13H Complex., PDB code: 8k62 was solved by X.Liang, G.Yinping, L.Feng, Z.Jiang, X.Ke, Y.Shengyong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.28 / 1.99
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 56.502, 56.502, 192.135, 90, 90, 120
R / Rfree (%) 20.4 / 27.8

Other elements in 8k62:

The structure of Crystal Structure of ALKBH1 and 13H Complex. also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of ALKBH1 and 13H Complex. (pdb code 8k62). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of ALKBH1 and 13H Complex., PDB code: 8k62:

Manganese binding site 1 out of 1 in 8k62

Go back to Manganese Binding Sites List in 8k62
Manganese binding site 1 out of 1 in the Crystal Structure of ALKBH1 and 13H Complex.


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of ALKBH1 and 13H Complex. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn401

b:35.0
occ:1.00
O A:HOH507 1.8 33.7 1.0
N14 A:IAU402 1.9 34.3 1.0
NE2 A:HIS287 2.0 25.8 1.0
NE2 A:HIS231 2.3 43.4 1.0
OD1 A:ASP233 2.3 31.2 1.0
N07 A:IAU402 2.5 33.3 1.0
C13 A:IAU402 2.7 39.2 1.0
H131 A:IAU402 2.7 47.0 1.0
C09 A:IAU402 2.8 43.4 1.0
CE1 A:HIS287 2.9 39.5 1.0
CG A:ASP233 3.0 43.1 1.0
N06 A:IAU402 3.0 33.3 1.0
OD2 A:ASP233 3.0 38.2 1.0
CE1 A:HIS231 3.0 44.7 1.0
CD2 A:HIS287 3.0 36.6 1.0
HE1 A:HIS231 3.0 53.6 1.0
HE1 A:HIS287 3.1 47.4 1.0
HD2 A:HIS287 3.3 44.0 1.0
CD2 A:HIS231 3.4 46.5 1.0
C08 A:IAU402 3.7 41.3 1.0
HD2 A:HIS231 3.7 55.8 1.0
C12 A:IAU402 4.0 40.7 1.0
ND1 A:HIS287 4.0 34.3 1.0
H081 A:IAU402 4.0 49.5 1.0
N10 A:IAU402 4.1 45.2 1.0
CG A:HIS287 4.1 31.0 1.0
ND1 A:HIS231 4.2 45.6 1.0
C05 A:IAU402 4.3 38.1 1.0
HD21 A:LEU228 4.3 44.2 1.0
CG A:HIS231 4.4 43.9 1.0
CB A:ASP233 4.4 40.8 1.0
HA A:ASP233 4.5 47.0 1.0
HE1 A:MET278 4.5 66.5 1.0
HD23 A:LEU228 4.6 44.2 1.0
C11 A:IAU402 4.6 47.7 1.0
C04 A:IAU402 4.6 42.6 1.0
HD1 A:HIS287 4.8 41.1 1.0
CA A:ASP233 4.9 39.2 1.0
H A:ASP233 4.9 50.4 1.0
CD2 A:LEU228 4.9 36.8 1.0
HB3 A:ASP233 4.9 49.0 1.0
N A:ASP233 4.9 42.0 1.0
HB2 A:ASP233 4.9 49.0 1.0
HD1 A:HIS231 4.9 54.8 1.0
HG21 A:THR342 5.0 40.2 1.0
H051 A:IAU402 5.0 45.8 1.0
O15 A:IAU402 5.0 57.9 1.0

Reference:

X.Liang, G.Yinping, X.Ke, Y.Shengyong. Crystal Structure of ALKBH1 and 13H Complex To Be Published.
Page generated: Sun Oct 6 13:23:29 2024

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