Manganese in PDB 8i6v: Cryo-Em Structure of the Polyphosphate Polymerase Vtc Complex(VTC4/VTC3/VTC1)

All present enzymatic activity of Cryo-Em Structure of the Polyphosphate Polymerase Vtc Complex(VTC4/VTC3/VTC1):
2.7.4.1;

The binding sites of Manganese atom in the Cryo-Em Structure of the Polyphosphate Polymerase Vtc Complex(VTC4/VTC3/VTC1) (pdb code 8i6v). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Cryo-Em Structure of the Polyphosphate Polymerase Vtc Complex(VTC4/VTC3/VTC1), PDB code: 8i6v:

Manganese binding site 1 out of 1 in the Cryo-Em Structure of the Polyphosphate Polymerase Vtc Complex(VTC4/VTC3/VTC1)


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Cryo-Em Structure of the Polyphosphate Polymerase Vtc Complex(VTC4/VTC3/VTC1) within 5.0Å range: probe atom residue distance (Å) B Occ E:Mn802 b:72.7 occ:1.00 O3A E:3PO801 2.1 48.0 1.0 OE1 E:GLU426 2.5 14.5 1.0 OE2 E:GLU426 2.6 14.5 1.0 CD E:GLU426 2.9 14.5 1.0 PB E:3PO801 3.0 48.0 1.0 O1B E:3PO801 3.2 48.0 1.0 O3B E:3PO801 3.2 48.0 1.0 PA E:3PO801 3.3 48.0 1.0 O5' E:3PO801 3.4 48.0 1.0 NH2 E:ARG361 3.7 11.9 1.0 O1A E:3PO801 4.1 48.0 1.0 CE E:LYS200 4.2 17.6 1.0 O2B E:3PO801 4.4 48.0 1.0 O1G E:3PO801 4.4 48.0 1.0 CG E:GLU426 4.4 14.5 1.0 PG E:3PO801 4.5 48.0 1.0 O2A E:3PO801 4.5 48.0 1.0 NZ E:LYS200 4.6 17.6 1.0 O E:HOH901 4.6 35.1 1.0 NZ E:LYS458 4.8 16.7 1.0 CZ E:ARG361 4.8 11.9 1.0

A.Mayer, S.Wu, S.Ye. Cryo-Em Structure of the Polyphosphate Polymerase Vtc Complex(VTC4/VTC3/VTC1) To Be Published.