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Manganese in PDB 8gyg: Purification ,Crystallization and X-Ray Diffraction Analysis of A Novel Arysulfatase From Pseudoalteromonas Atlantica T6C

Protein crystallography data

The structure of Purification ,Crystallization and X-Ray Diffraction Analysis of A Novel Arysulfatase From Pseudoalteromonas Atlantica T6C, PDB code: 8gyg was solved by P.P.Dong, Y.K.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.59 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 55.17, 61.38, 89.6, 90, 97.88, 90
R / Rfree (%) 20 / 24.4

Other elements in 8gyg:

The structure of Purification ,Crystallization and X-Ray Diffraction Analysis of A Novel Arysulfatase From Pseudoalteromonas Atlantica T6C also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Manganese Binding Sites:

The binding sites of Manganese atom in the Purification ,Crystallization and X-Ray Diffraction Analysis of A Novel Arysulfatase From Pseudoalteromonas Atlantica T6C (pdb code 8gyg). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Purification ,Crystallization and X-Ray Diffraction Analysis of A Novel Arysulfatase From Pseudoalteromonas Atlantica T6C, PDB code: 8gyg:

Manganese binding site 1 out of 1 in 8gyg

Go back to Manganese Binding Sites List in 8gyg
Manganese binding site 1 out of 1 in the Purification ,Crystallization and X-Ray Diffraction Analysis of A Novel Arysulfatase From Pseudoalteromonas Atlantica T6C


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Purification ,Crystallization and X-Ray Diffraction Analysis of A Novel Arysulfatase From Pseudoalteromonas Atlantica T6C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn403

b:57.4
occ:1.00
O A:HOH670 2.2 22.5 1.0
O A:HOH584 2.3 26.7 1.0
CA A:CA401 2.9 10.2 1.0
O A:HOH542 3.2 21.1 1.0
CE1 A:HIS245 3.4 22.2 1.0
NE2 A:HIS245 3.4 25.3 1.0
OD2 A:ASP191 3.4 18.9 1.0
CA A:CA402 3.6 11.2 1.0
OD1 A:ASP72 3.8 11.9 1.0
CA A:GLY18 3.8 19.9 1.0
CE1 A:HIS267 3.9 16.5 1.0
O A:HOH647 4.0 32.9 1.0
NE2 A:HIS267 4.0 17.4 1.0
N A:GLY18 4.2 16.4 1.0
CG A:ASP191 4.5 18.5 1.0
CG A:ASP72 4.6 21.3 1.0
OD2 A:ASP72 4.6 16.9 1.0
ND1 A:HIS245 4.6 19.7 1.0
CD2 A:HIS245 4.8 22.7 1.0
CD A:PRO19 4.8 21.1 1.0
NE2 A:HIS159 4.8 27.9 1.0
CE1 A:HIS159 4.8 21.7 1.0
OH B:TYR120 4.8 31.4 1.0
ND1 A:HIS70 4.8 24.5 1.0
NE2 B:GLN86 4.9 16.2 1.0

Reference:

P.P.Dong, Y.K.Wu. Purification ,Crystallization and X-Ray Diffraction Analysis of A Novel Arysulfatase From Pseudoalteromonas Atlantica T6C To Be Published.
Page generated: Thu Dec 28 11:05:17 2023

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