Atomistry » Manganese » PDB 7z03-8awv » 8acu
Atomistry »
  Manganese »
    PDB 7z03-8awv »
      8acu »

Manganese in PDB 8acu: Structure of Bacillus Subtilis Rel in Complex with Darb

Enzymatic activity of Structure of Bacillus Subtilis Rel in Complex with Darb

All present enzymatic activity of Structure of Bacillus Subtilis Rel in Complex with Darb:
2.7.6.5;

Protein crystallography data

The structure of Structure of Bacillus Subtilis Rel in Complex with Darb, PDB code: 8acu was solved by A.Garcia-Pino, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 75.72 / 2.97
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 94.401, 98.141, 126.775, 90, 90, 90
R / Rfree (%) 26 / 31.5

Manganese Binding Sites:

The binding sites of Manganese atom in the Structure of Bacillus Subtilis Rel in Complex with Darb (pdb code 8acu). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Structure of Bacillus Subtilis Rel in Complex with Darb, PDB code: 8acu:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in 8acu

Go back to Manganese Binding Sites List in 8acu
Manganese binding site 1 out of 2 in the Structure of Bacillus Subtilis Rel in Complex with Darb


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structure of Bacillus Subtilis Rel in Complex with Darb within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn401

b:99.8
occ:1.00
OD2 A:ASP78 1.9 112.8 1.0
OD1 A:ASP144 2.1 80.5 1.0
NE2 A:HIS77 2.3 96.2 1.0
NE2 A:HIS53 2.5 80.8 1.0
CG A:ASP78 2.9 107.5 1.0
CD2 A:HIS77 3.0 89.8 1.0
CD2 A:HIS53 3.1 87.8 1.0
CG A:ASP144 3.1 91.5 1.0
OD1 A:ASP78 3.2 108.6 1.0
CE1 A:HIS77 3.5 99.5 1.0
CE1 A:HIS53 3.5 86.4 1.0
OD2 A:ASP144 3.5 92.9 1.0
CB A:ASP78 4.2 99.2 1.0
CG A:HIS77 4.2 88.1 1.0
CG A:HIS53 4.3 84.3 1.0
CB A:ASP144 4.4 86.3 1.0
ND1 A:HIS77 4.4 95.4 1.0
ND1 A:HIS53 4.4 97.4 1.0
ND2 A:ASN148 4.7 87.1 1.0

Manganese binding site 2 out of 2 in 8acu

Go back to Manganese Binding Sites List in 8acu
Manganese binding site 2 out of 2 in the Structure of Bacillus Subtilis Rel in Complex with Darb


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Structure of Bacillus Subtilis Rel in Complex with Darb within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn401

b:115.0
occ:1.00
OD1 B:ASP144 2.1 84.0 1.0
OD2 B:ASP78 2.2 112.5 1.0
NE2 B:HIS53 2.2 118.0 1.0
NE2 B:HIS77 2.8 99.3 1.0
CD2 B:HIS53 3.1 125.8 1.0
CE1 B:HIS53 3.1 113.5 1.0
CG B:ASP144 3.1 93.5 1.0
CG B:ASP78 3.2 109.1 1.0
OD2 B:ASP144 3.4 92.3 1.0
CD2 B:HIS77 3.5 99.4 1.0
OD1 B:ASP78 3.5 114.2 1.0
CE1 B:HIS77 3.9 114.5 1.0
ND1 B:HIS53 4.1 124.3 1.0
CG B:HIS53 4.1 127.7 1.0
CB B:ASP144 4.4 71.3 1.0
ND2 B:ASN148 4.5 105.9 1.0
CB B:ASP78 4.5 104.7 1.0
CG B:HIS77 4.7 109.7 1.0
OD1 B:ASN148 4.8 106.3 1.0
ND1 B:HIS77 4.9 114.1 1.0

Reference:

A.Garcia-Pino, A.Garcia-Pino. N/A N/A.
Page generated: Sun Oct 6 11:18:10 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy