Manganese in PDB 7ui6: Cryoem Structure of LARGE1 From C1 Reconstruction

The binding sites of Manganese atom in the Cryoem Structure of LARGE1 From C1 Reconstruction (pdb code 7ui6). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 4 binding sites of Manganese where determined in the Cryoem Structure of LARGE1 From C1 Reconstruction, PDB code: 7ui6:
Jump to Manganese binding site number: 1; 2; 3; 4;

Manganese binding site 1 out of 4 in the Cryoem Structure of LARGE1 From C1 Reconstruction


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Cryoem Structure of LARGE1 From C1 Reconstruction within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn801 b:175.2 occ:1.00 OD2 A:ASP244 2.2 154.3 1.0 OD2 A:ASP242 2.3 156.8 1.0 NE2 A:HIS380 2.4 161.1 1.0 CE1 A:HIS380 2.9 161.1 1.0 CG A:ASP244 3.0 154.3 1.0 OD1 A:ASP244 3.2 154.3 1.0 CG A:ASP242 3.5 156.8 1.0 CD2 A:HIS380 3.7 161.1 1.0 OH A:TYR216 4.0 197.1 1.0 ND1 A:HIS380 4.2 161.1 1.0 CB A:ASP242 4.3 156.8 1.0 OD1 A:ASP242 4.4 156.8 1.0 CB A:ASP244 4.4 154.3 1.0 O A:TRP381 4.5 153.5 1.0 NZ A:LYS386 4.6 190.9 1.0 CG A:HIS380 4.6 161.1 1.0 CA A:ASN382 4.8 177.6 1.0

Manganese binding site 2 out of 4 in the Cryoem Structure of LARGE1 From C1 Reconstruction


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Cryoem Structure of LARGE1 From C1 Reconstruction within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn802 b:109.5 occ:1.00 NE2 A:HIS708 2.3 101.6 1.0 CE1 A:HIS708 2.9 101.6 1.0 NE2 A:HIS705 3.0 83.3 1.0 CE1 A:HIS705 3.4 83.3 1.0 CD2 A:HIS708 3.4 101.6 1.0 NH2 A:ARG626 3.6 106.5 1.0 CD2 A:HIS705 4.0 83.3 1.0 ND1 A:HIS708 4.1 101.6 1.0 CG A:HIS708 4.4 101.6 1.0 ND1 A:HIS705 4.4 83.3 1.0 CZ A:ARG626 4.6 106.5 1.0 CE1 A:PHE625 4.7 99.9 1.0 CG A:HIS705 4.7 83.3 1.0 OD2 A:ASP565 4.8 85.8 1.0 CB A:ASP565 4.9 85.8 1.0 NE A:ARG626 4.9 106.5 1.0 CG A:ASP565 4.9 85.8 1.0

Manganese binding site 3 out of 4 in the Cryoem Structure of LARGE1 From C1 Reconstruction


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 3 of Cryoem Structure of LARGE1 From C1 Reconstruction within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn801 b:160.8 occ:1.00 OD2 B:ASP244 2.1 137.7 1.0 NE2 B:HIS380 2.4 140.9 1.0 CE1 B:HIS380 2.7 140.9 1.0 OD2 B:ASP242 3.0 136.6 1.0 CG B:ASP244 3.0 137.7 1.0 OD1 B:ASP244 3.1 137.7 1.0 CD2 B:HIS380 3.6 140.9 1.0 CG B:ASP242 3.6 136.6 1.0 ND1 B:HIS380 3.9 140.9 1.0 CB B:ASP242 4.3 136.6 1.0 OD1 B:ASP242 4.3 136.6 1.0 CG B:HIS380 4.4 140.9 1.0 CB B:ASP244 4.4 137.7 1.0 OH B:TYR216 4.5 201.1 1.0 CB B:ASN382 4.6 164.8 1.0 CA B:ASN382 4.8 164.8 1.0

Manganese binding site 4 out of 4 in the Cryoem Structure of LARGE1 From C1 Reconstruction


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 4 of Cryoem Structure of LARGE1 From C1 Reconstruction within 5.0Å range: probe atom residue distance (Å) B Occ B:Mn802 b:129.8 occ:1.00 NE2 B:HIS705 2.4 125.8 1.0 CE1 B:HIS705 2.7 125.8 1.0 OD2 B:ASP565 3.6 132.1 1.0 CD2 B:HIS705 3.8 125.8 1.0 ND1 B:HIS705 4.0 125.8 1.0 NH2 B:ARG626 4.1 153.4 1.0 CG B:ASP565 4.5 132.1 1.0 CG B:HIS705 4.5 125.8 1.0 CB B:ASP565 4.6 132.1 1.0 CB B:HIS708 4.8 141.4 1.0 N B:HIS708 5.0 141.4 1.0

K.P.Campbell, S.Joseph, N.J.Schnicker, K.P.Campbell. N/A N/A.