Manganese in PDB 7n47: The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988514

The structure of The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988514, PDB code: 7n47 was solved by M.G.Cuypers, J.P.Slavish, Z.Rankovic, S.W.White, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.37 / 2.37
Space group	I 4 2 2
Cell size a, b, c (Å), α, β, γ (°)	89.596, 89.596, 133.159, 90, 90, 90
R / Rfree (%)	22 / 25.9

The binding sites of Manganese atom in the The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988514 (pdb code 7n47). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988514, PDB code: 7n47:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988514


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988514 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn201 b:56.9 occ:1.00 O13 A:09Y207 1.8 77.0 1.0 O A:ILE120 2.1 66.6 1.0 OD2 A:ASP108 2.1 55.6 1.0 OE2 A:GLU119 2.2 63.5 1.0 NE2 A:HIS41 2.3 66.6 1.0 O15 A:09Y207 2.4 65.2 1.0 C12 A:09Y207 2.7 61.0 1.0 C14 A:09Y207 2.9 69.7 1.0 CG A:ASP108 3.0 58.6 1.0 CE1 A:HIS41 3.1 55.0 1.0 OD1 A:ASP108 3.2 63.2 1.0 C A:ILE120 3.2 65.2 1.0 CD A:GLU119 3.2 67.2 1.0 CD2 A:HIS41 3.3 65.8 1.0 N A:ILE120 3.6 54.9 1.0 O A:HOH303 3.7 68.2 1.0 OE1 A:GLU119 3.8 68.8 1.0 MN A:MN202 3.9 68.7 1.0 CA A:ILE120 3.9 53.5 1.0 C11 A:09Y207 4.1 85.5 1.0 ND1 A:HIS41 4.2 57.5 1.0 CB A:ILE120 4.2 62.9 1.0 N16 A:09Y207 4.3 75.5 1.0 N A:GLY121 4.3 63.4 1.0 CG A:HIS41 4.3 56.7 1.0 CG A:GLU119 4.4 58.5 1.0 CB A:ASP108 4.4 55.2 1.0 O10 A:09Y207 4.4 82.5 1.0 C A:GLU119 4.5 55.1 1.0 CA A:GLY121 4.6 60.7 1.0 C09 A:09Y207 4.7 76.6 1.0 O A:HOH305 4.9 62.5 1.0 CA A:GLU119 4.9 56.5 1.0 OE1 A:GLU80 5.0 72.0 1.0

Manganese binding site 2 out of 2 in the The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988514


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988514 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn202 b:68.7 occ:1.00 O10 A:09Y207 1.8 82.5 1.0 O A:HOH303 2.1 68.2 1.0 OE1 A:GLU80 2.1 72.0 1.0 OD1 A:ASP108 2.2 63.2 1.0 O A:HOH302 2.3 57.9 1.0 O13 A:09Y207 2.6 77.0 1.0 C09 A:09Y207 2.7 76.6 1.0 CG A:ASP108 3.3 58.6 1.0 CD A:GLU80 3.3 60.8 1.0 C12 A:09Y207 3.4 61.0 1.0 C11 A:09Y207 3.5 85.5 1.0 N08 A:09Y207 3.7 83.2 1.0 CE1 A:HIS41 3.8 55.0 1.0 OD2 A:ASP108 3.8 55.6 1.0 MN A:MN201 3.9 56.9 1.0 C07 A:09Y207 3.9 100.2 1.0 O A:PRO107 4.1 64.3 1.0 O A:LEU106 4.2 69.3 1.0 OE2 A:GLU80 4.2 79.1 1.0 CG A:GLU80 4.2 63.7 1.0 CB A:GLU80 4.3 50.8 1.0 C A:PRO107 4.3 67.0 1.0 CB A:ASP108 4.4 55.2 1.0 CA A:ASP108 4.4 58.3 1.0 NE2 A:HIS41 4.4 66.6 1.0 OE1 A:GLU119 4.5 68.8 1.0 N A:ASP108 4.5 53.0 1.0 OE2 A:GLU119 4.6 63.5 1.0 ND1 A:HIS41 4.8 57.5 1.0 C14 A:09Y207 4.8 69.7 1.0 N18 A:09Y207 4.9 94.5 1.0 CA A:GLU80 5.0 56.7 1.0

M.G.Cuypers, J.P.Slavish, Z.Rankovic, S.W.White. The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988514 To Be Published.