Manganese in PDB 7mty: The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988569

The structure of The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988569, PDB code: 7mty was solved by M.G.Cuypers, J.P.Slavish, Z.Rankovic, S.W.White, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.44 / 2.38
Space group	I 4 2 2
Cell size a, b, c (Å), α, β, γ (°)	89.73, 89.73, 134.023, 90, 90, 90
R / Rfree (%)	22 / 25.8

The structure of The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988569 also contains other interesting chemical elements:

Fluorine

(F)

2 atoms

The binding sites of Manganese atom in the The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988569 (pdb code 7mty). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988569, PDB code: 7mty:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988569


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988569 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn402 b:64.9 occ:1.00 O15 A:W5V404 1.8 65.0 1.0 OD2 A:ASP108 2.2 60.2 1.0 O A:ILE120 2.2 79.8 1.0 OE2 A:GLU119 2.2 72.2 1.0 O13 A:W5V404 2.2 86.3 1.0 NE2 A:HIS41 2.3 77.5 1.0 C14 A:W5V404 2.5 74.3 1.0 C12 A:W5V404 2.7 65.9 1.0 CG A:ASP108 3.0 73.1 1.0 CE1 A:HIS41 3.1 66.2 1.0 OD1 A:ASP108 3.1 60.7 1.0 CD A:GLU119 3.2 69.2 1.0 C A:ILE120 3.3 68.8 1.0 CD2 A:HIS41 3.4 66.8 1.0 N A:ILE120 3.6 63.9 1.0 OE1 A:GLU119 3.7 75.7 1.0 MN A:MN403 3.7 74.3 1.0 O A:HOH503 3.8 70.5 1.0 N16 A:W5V404 3.9 74.2 1.0 CA A:ILE120 3.9 59.2 1.0 ND1 A:HIS41 4.2 64.4 1.0 C11 A:W5V404 4.2 85.0 1.0 CB A:ILE120 4.3 65.3 1.0 CG A:HIS41 4.4 61.7 1.0 CB A:ASP108 4.4 63.8 1.0 N A:GLY121 4.4 74.1 1.0 CG A:GLU119 4.4 66.8 1.0 C A:GLU119 4.5 73.3 1.0 O10 A:W5V404 4.7 83.6 1.0 CA A:GLY121 4.7 64.4 1.0 O A:HOH502 4.8 73.6 1.0 CA A:GLU119 4.9 67.1 1.0

Manganese binding site 2 out of 2 in the The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988569


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988569 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn403 b:74.3 occ:1.00 O10 A:W5V404 1.8 83.6 1.0 O13 A:W5V404 2.0 86.3 1.0 OD1 A:ASP108 2.2 60.7 1.0 O A:HOH503 2.2 70.5 1.0 O A:HOH504 2.3 68.6 1.0 OE1 A:GLU80 2.4 70.3 1.0 C09 A:W5V404 2.6 74.6 1.0 C12 A:W5V404 2.8 65.9 1.0 C11 A:W5V404 3.1 85.0 1.0 CG A:ASP108 3.2 73.1 1.0 CD A:GLU80 3.5 79.1 1.0 CE1 A:HIS41 3.7 66.2 1.0 MN A:MN402 3.7 64.9 1.0 N08 A:W5V404 3.8 85.5 1.0 OD2 A:ASP108 3.8 60.2 1.0 C14 A:W5V404 4.1 74.3 1.0 CG A:GLU80 4.2 60.5 1.0 CB A:GLU80 4.2 54.8 1.0 O A:PRO107 4.2 64.1 1.0 O A:LEU106 4.3 79.6 1.0 NE2 A:HIS41 4.3 77.5 1.0 CB A:ASP108 4.4 63.8 1.0 CA A:ASP108 4.4 70.8 1.0 C A:PRO107 4.4 77.2 1.0 N18 A:W5V404 4.4 95.3 1.0 OE2 A:GLU80 4.5 94.5 1.0 OE1 A:GLU119 4.5 75.7 1.0 O15 A:W5V404 4.5 65.0 1.0 N A:ASP108 4.5 56.1 1.0 ND1 A:HIS41 4.6 64.4 1.0 OE2 A:GLU119 4.7 72.2 1.0 CA A:GLU80 5.0 59.0 1.0

M.G.Cuypers, J.P.Slavish, Z.Rankovic, S.W.White. The Crystal Structure of Wild Type Pa Endonuclease (2009/H1N1/California) in Complex with SJ000988569 To Be Published.