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Manganese in PDB 7me1: Yfea Oligomer Crystal 1, Form 1

Protein crystallography data

The structure of Yfea Oligomer Crystal 1, Form 1, PDB code: 7me1 was solved by C.D.Radka, S.G.Aller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.10 / 2.05
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.52, 76.91, 110.29, 90, 90, 90
R / Rfree (%) 16.6 / 19.5

Other elements in 7me1:

The structure of Yfea Oligomer Crystal 1, Form 1 also contains other interesting chemical elements:

Iron (Fe) 2 atoms
Zinc (Zn) 3 atoms

Manganese Binding Sites:

The binding sites of Manganese atom in the Yfea Oligomer Crystal 1, Form 1 (pdb code 7me1). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Yfea Oligomer Crystal 1, Form 1, PDB code: 7me1:

Manganese binding site 1 out of 1 in 7me1

Go back to Manganese Binding Sites List in 7me1
Manganese binding site 1 out of 1 in the Yfea Oligomer Crystal 1, Form 1


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Yfea Oligomer Crystal 1, Form 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn403

b:48.0
occ:0.48
ZN B:ZN404 0.4 49.7 0.5
OD1 B:ASP114 3.4 53.4 1.0
CG B:ASP114 4.6 43.6 1.0

Reference:

C.D.Radka, S.G.Aller. Yersinia Pestis Substrate-Binding Protein Yfea Site 2 Is A Dynamic and Polyspecific Surface Metal Binding Site To Be Published.
Page generated: Sun Oct 6 10:04:32 2024

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