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Manganese in PDB 7exb: Dfga-Dfgb Complex Apo 2.4 Angstrom

Protein crystallography data

The structure of Dfga-Dfgb Complex Apo 2.4 Angstrom, PDB code: 7exb was solved by T.Mori, M.Senda, T.Senda, I.Abe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.10 / 2.40
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 138.97, 138.97, 227.028, 90, 90, 120
R / Rfree (%) 17.8 / 20.3

Manganese Binding Sites:

The binding sites of Manganese atom in the Dfga-Dfgb Complex Apo 2.4 Angstrom (pdb code 7exb). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Dfga-Dfgb Complex Apo 2.4 Angstrom, PDB code: 7exb:

Manganese binding site 1 out of 1 in 7exb

Go back to Manganese Binding Sites List in 7exb
Manganese binding site 1 out of 1 in the Dfga-Dfgb Complex Apo 2.4 Angstrom


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Dfga-Dfgb Complex Apo 2.4 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn301

b:38.9
occ:0.50
OE2 A:GLU155 2.0 50.6 1.0
OE1 A:GLU260 2.1 53.5 1.0
O A:HOH528 2.2 45.6 1.0
OD2 A:ASP187 2.3 43.4 1.0
ND1 A:HIS224 2.4 44.7 1.0
O A:HOH565 2.8 52.2 1.0
CD A:GLU155 3.1 48.1 1.0
CD A:GLU260 3.1 50.2 1.0
CG A:ASP187 3.3 42.7 1.0
CE1 A:HIS224 3.3 42.5 1.0
OE2 A:GLU260 3.5 53.4 1.0
CG A:HIS224 3.5 46.6 1.0
OE1 A:GLU155 3.5 49.5 1.0
NZ A:LYS226 3.7 44.9 1.0
CB A:HIS224 3.8 39.9 1.0
CB A:ASP187 3.8 32.7 1.0
OD1 A:ASP187 4.2 42.8 1.0
CE A:LYS226 4.3 46.0 1.0
CG A:GLU155 4.4 44.6 1.0
NE2 A:HIS224 4.4 44.2 1.0
CG A:GLU260 4.5 44.2 1.0
CD2 A:HIS224 4.6 42.9 1.0
NH1 A:ARG118 4.8 48.7 1.0
CB A:GLU260 4.9 37.7 1.0

Reference:

T.Mori, M.Senda, T.Senda, I.Abe. Dfga-Dfgb Complex Apo 2.4 Angstrom To Be Published.
Page generated: Sun Oct 6 08:38:21 2024

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