Manganese in PDB 7ckm: Structure of Machupo Virus Polymerase Bound to Z Matrix Protein (Monomeric Complex)

Enzymatic activity of Structure of Machupo Virus Polymerase Bound to Z Matrix Protein (Monomeric Complex)

All present enzymatic activity of Structure of Machupo Virus Polymerase Bound to Z Matrix Protein (Monomeric Complex):
2.7.7.48;

Other elements in 7ckm:

The structure of Structure of Machupo Virus Polymerase Bound to Z Matrix Protein (Monomeric Complex) also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Manganese Binding Sites:

The binding sites of Manganese atom in the Structure of Machupo Virus Polymerase Bound to Z Matrix Protein (Monomeric Complex) (pdb code 7ckm). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Structure of Machupo Virus Polymerase Bound to Z Matrix Protein (Monomeric Complex), PDB code: 7ckm:

Manganese binding site 1 out of 1 in 7ckm

Go back to Manganese Binding Sites List in 7ckm
Manganese binding site 1 out of 1 in the Structure of Machupo Virus Polymerase Bound to Z Matrix Protein (Monomeric Complex)


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structure of Machupo Virus Polymerase Bound to Z Matrix Protein (Monomeric Complex) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn2301

b:64.3
occ:1.00
CG A:ASP1330 2.5 30.5 1.0
OD1 A:ASP1188 2.6 22.7 1.0
OD2 A:ASP1330 2.6 30.5 1.0
OD2 A:ASP1188 2.6 22.7 1.0
OD1 A:ASP1330 2.6 30.5 1.0
OE1 A:GLU1381 2.6 36.9 1.0
CG A:ASP1188 2.9 22.7 1.0
CB A:ASP1330 3.3 30.5 1.0
OE2 A:GLU1381 3.3 36.9 1.0
CD A:GLU1381 3.3 36.9 1.0
N A:LYS1383 4.4 26.6 1.0
CB A:ASP1188 4.4 22.7 1.0
CA A:PHE1382 4.7 36.9 1.0
CA A:ASP1330 4.8 30.5 1.0
CG A:GLU1381 4.8 36.9 1.0
O A:GLU1381 4.9 36.9 1.0
CD1 A:PHE1382 5.0 36.9 1.0

Reference:

X.Xu, R.Peng, Q.Peng, Y.Shi. Structure of Machupo Virus Polymerase Bound to Z Matrix Protein To Be Published.
Page generated: Mon Jul 12 15:20:14 2021

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