Manganese in PDB 7bvs: Dfga-Dfgb Complex Apo

Protein crystallography data

The structure of Dfga-Dfgb Complex Apo, PDB code: 7bvs was solved by T.Mori, H.He, I.Abe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.94 / 2.85
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 138.213, 138.213, 227.001, 90, 90, 120
R / Rfree (%) 20.2 / 23.7

Manganese Binding Sites:

The binding sites of Manganese atom in the Dfga-Dfgb Complex Apo (pdb code 7bvs). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Dfga-Dfgb Complex Apo, PDB code: 7bvs:

Manganese binding site 1 out of 1 in 7bvs

Go back to Manganese Binding Sites List in 7bvs
Manganese binding site 1 out of 1 in the Dfga-Dfgb Complex Apo


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Dfga-Dfgb Complex Apo within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn303

b:30.0
occ:1.00
O A:HOH401 1.6 30.0 1.0
OE2 A:GLU155 1.8 58.5 1.0
OD2 A:ASP187 2.1 45.4 1.0
OE2 A:GLU260 2.2 66.1 1.0
ND1 A:HIS224 2.5 55.9 1.0
CD A:GLU155 2.9 59.2 1.0
CG A:ASP187 3.1 48.0 1.0
CD A:GLU260 3.3 60.9 1.0
CE1 A:HIS224 3.4 62.3 1.0
CG A:HIS224 3.5 52.1 1.0
OE1 A:GLU155 3.6 55.1 1.0
CB A:HIS224 3.8 47.6 1.0
CB A:ASP187 3.8 45.2 1.0
OE1 A:GLU260 4.0 62.0 1.0
CE A:LYS226 4.0 47.9 1.0
OD1 A:ASP187 4.1 52.3 1.0
CG A:GLU155 4.1 47.0 1.0
CG A:GLU260 4.2 46.5 1.0
NZ A:LYS226 4.3 56.8 1.0
NE2 A:HIS224 4.5 58.7 1.0
CD2 A:HIS224 4.6 50.1 1.0
CB A:GLU260 4.8 43.0 1.0
CA A:ASP187 5.0 42.0 1.0

Reference:

T.Mori, H.He, I.Abe. Dgpa-Dgpb Complex Apo To Be Published.
Page generated: Sat Apr 17 16:51:27 2021

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