Manganese in PDB 6sfa: Trypanosoma Cruzi Farnesyl Diphosphate Synthase Apo Structure with Mn Ions

The structure of Trypanosoma Cruzi Farnesyl Diphosphate Synthase Apo Structure with Mn Ions, PDB code: 6sfa was solved by F.Magari, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.62 / 1.90
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	57.746, 57.746, 397.563, 90.00, 90.00, 120.00
R / Rfree (%)	16.7 / 20.2

The binding sites of Manganese atom in the Trypanosoma Cruzi Farnesyl Diphosphate Synthase Apo Structure with Mn Ions (pdb code 6sfa). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Trypanosoma Cruzi Farnesyl Diphosphate Synthase Apo Structure with Mn Ions, PDB code: 6sfa:
Jump to Manganese binding site number: 1; 2;

Manganese binding site 1 out of 2 in the Trypanosoma Cruzi Farnesyl Diphosphate Synthase Apo Structure with Mn Ions


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Trypanosoma Cruzi Farnesyl Diphosphate Synthase Apo Structure with Mn Ions within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn401 b:31.5 occ:0.39 O A:HOH579 2.0 39.8 1.0 O A:HOH600 2.1 40.7 1.0 OD2 A:ASP250 2.1 39.8 1.0 O A:HOH592 2.1 30.9 1.0 O A:HOH648 2.2 46.4 1.0 O A:HOH506 2.2 35.7 1.0 CG A:ASP250 3.2 40.0 1.0 HE22 A:GLN247 3.4 45.2 1.0 OD1 A:ASP250 3.6 45.7 1.0 HB2 A:ASP254 3.7 60.4 1.0 OD2 A:ASP254 4.0 39.5 1.0 NE2 A:GLN247 4.1 37.7 1.0 HE21 A:GLN247 4.1 45.2 1.0 OD2 A:ASP268 4.2 38.5 1.0 OD1 A:ASP268 4.4 34.3 1.0 CB A:ASP250 4.5 31.9 1.0 HB3 A:ASP250 4.5 38.2 1.0 HA A:ASP251 4.5 37.3 1.0 OD1 A:ASP251 4.5 34.8 1.0 O A:ASP250 4.6 38.7 1.0 CB A:ASP254 4.6 50.3 1.0 CG A:ASP254 4.7 39.3 1.0 O A:HOH658 4.7 60.6 1.0 C A:ASP250 4.7 34.8 1.0 CG A:ASP268 4.7 40.0 1.0 HB3 A:ASP254 5.0 60.4 1.0

Manganese binding site 2 out of 2 in the Trypanosoma Cruzi Farnesyl Diphosphate Synthase Apo Structure with Mn Ions


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Trypanosoma Cruzi Farnesyl Diphosphate Synthase Apo Structure with Mn Ions within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn402 b:52.7 occ:0.58 OD2 A:ASP102 2.3 40.8 1.0 HE22 A:GLN167 3.0 49.3 1.0 CG A:ASP102 3.1 48.4 1.0 OD1 A:ASP102 3.2 44.1 1.0 HB3 A:ASP98 3.4 30.2 1.0 OE1 A:GLN167 3.7 43.9 1.0 NE2 A:GLN167 3.8 41.1 1.0 OD2 A:ASP170 3.8 41.0 1.0 HZ2 A:LYS273 3.9 69.5 1.0 HZ1 A:LYS273 4.0 69.5 1.0 HG12 A:VAL171 4.0 57.0 1.0 CD A:GLN167 4.1 46.4 1.0 CB A:ASP98 4.2 25.2 1.0 NZ A:LYS273 4.3 57.9 1.0 HE21 A:GLN167 4.5 49.3 1.0 O A:HOH551 4.5 41.3 1.0 HG13 A:VAL171 4.5 57.0 1.0 CG A:ASP98 4.5 31.1 1.0 CG1 A:VAL171 4.5 47.5 1.0 CB A:ASP102 4.6 27.5 1.0 HG11 A:VAL171 4.6 57.0 1.0 O A:ASP98 4.7 20.9 1.0 HA A:ASP98 4.7 26.9 1.0 HZ3 A:LYS273 4.7 69.5 1.0 OD2 A:ASP98 4.7 40.6 1.0 HB2 A:ASP102 4.8 33.0 1.0 HB3 A:ASP102 4.8 33.0 1.0 HB2 A:ASP98 4.9 30.2 1.0 CA A:ASP98 4.9 22.4 1.0 CG A:ASP170 5.0 33.2 1.0

F.Magari, A.Heine, G.Klebe. Trypanosoma Cruzi Farnesyl Diphosphate Synthase Apo Structure with Mn Ions To Be Published.