Manganese in PDB 6msu: Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F
Protein crystallography data
The structure of Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F, PDB code: 6msu
was solved by
J.F.Van Agthoven,
M.A.Arnaout,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
3.21 /
3.11
|
|
Space group
|
P 32 2 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
129.894,
129.894,
305.843,
90.00,
90.00,
120.00
|
|
R / Rfree (%)
|
n/a /
n/a
|
Other elements in 6msu:
The structure of Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F also contains other interesting chemical elements:
Manganese Binding Sites:
The binding sites of Manganese atom in the Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F
(pdb code 6msu). This binding sites where shown within
5.0 Angstroms radius around Manganese atom.
In total 8 binding sites of Manganese where determined in the
Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F, PDB code: 6msu:
Jump to Manganese binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Manganese binding site 1 out
of 8 in 6msu
Go back to
Manganese Binding Sites List in 6msu
Manganese binding site 1 out
of 8 in the Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F
 Mono view
 Stereo pair view
|
|
A full contact list of Manganese with other atoms in the Mn binding
site number 1 of Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mn1027
b:77.2
occ:1.00
|
OD1
|
A:ASN232
|
2.2
|
57.2
|
1.0
|
|
OD1
|
A:ASP238
|
2.2
|
59.9
|
1.0
|
|
OD1
|
A:ASP230
|
2.2
|
81.6
|
1.0
|
|
OD2
|
A:ASP238
|
2.2
|
64.1
|
1.0
|
|
OD2
|
A:ASP230
|
2.2
|
76.3
|
1.0
|
|
OD1
|
A:ASP234
|
2.4
|
73.8
|
1.0
|
|
CG
|
A:ASP230
|
2.4
|
65.0
|
1.0
|
|
CG
|
A:ASP238
|
2.5
|
58.6
|
1.0
|
|
O
|
A:ILE236
|
2.7
|
54.2
|
1.0
|
|
CG
|
A:ASN232
|
3.2
|
41.0
|
1.0
|
|
CG
|
A:ASP234
|
3.5
|
57.5
|
1.0
|
|
ND2
|
A:ASN232
|
3.6
|
23.4
|
1.0
|
|
CB
|
A:ASP230
|
3.7
|
47.9
|
1.0
|
|
C
|
A:ILE236
|
3.8
|
58.7
|
1.0
|
|
CA
|
A:ASP230
|
4.0
|
48.3
|
1.0
|
|
OD2
|
A:ASP234
|
4.0
|
58.4
|
1.0
|
|
CB
|
A:ASP238
|
4.0
|
42.6
|
1.0
|
|
N
|
A:PHE231
|
4.1
|
41.2
|
1.0
|
|
N
|
A:ASN232
|
4.2
|
53.4
|
1.0
|
|
N
|
A:ASP238
|
4.2
|
42.2
|
1.0
|
|
N
|
A:ASP234
|
4.4
|
53.9
|
1.0
|
|
C
|
A:ASP230
|
4.5
|
50.0
|
1.0
|
|
CB
|
A:ASN232
|
4.5
|
47.8
|
1.0
|
|
N
|
A:GLY233
|
4.6
|
51.6
|
1.0
|
|
C
|
A:ASP237
|
4.6
|
47.0
|
1.0
|
|
N
|
A:ILE236
|
4.6
|
57.4
|
1.0
|
|
O
|
A:ASP234
|
4.6
|
81.9
|
1.0
|
|
CA
|
A:ASP238
|
4.6
|
43.1
|
1.0
|
|
CA
|
A:ILE236
|
4.7
|
57.2
|
1.0
|
|
CB
|
A:ASP234
|
4.8
|
49.4
|
1.0
|
|
N
|
A:ASP237
|
4.8
|
64.6
|
1.0
|
|
C
|
A:ASP234
|
4.8
|
62.7
|
1.0
|
|
CA
|
A:ASN232
|
4.8
|
59.6
|
1.0
|
|
CA
|
A:ASP237
|
4.9
|
45.0
|
1.0
|
|
CB
|
A:ILE236
|
4.9
|
48.5
|
1.0
|
|
CA
|
A:ASP234
|
4.9
|
45.4
|
1.0
|
|
Manganese binding site 2 out
of 8 in 6msu
Go back to
Manganese Binding Sites List in 6msu
Manganese binding site 2 out
of 8 in the Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F
 Mono view
 Stereo pair view
|
|
A full contact list of Manganese with other atoms in the Mn binding
site number 2 of Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mn1028
b:89.5
occ:1.00
|
OD1
|
A:ASN286
|
2.2
|
62.3
|
1.0
|
|
OD1
|
A:ASP288
|
2.2
|
72.4
|
1.0
|
|
O
|
A:TYR290
|
2.2
|
72.0
|
1.0
|
|
OD1
|
A:ASP292
|
2.2
|
77.0
|
1.0
|
|
OD2
|
A:ASP292
|
2.2
|
67.0
|
1.0
|
|
CG
|
A:ASP292
|
2.5
|
70.5
|
1.0
|
|
OD2
|
A:ASP284
|
3.0
|
85.4
|
1.0
|
|
OD1
|
A:ASP284
|
3.0
|
71.7
|
1.0
|
|
CG
|
A:ASP284
|
3.0
|
68.6
|
1.0
|
|
CG
|
A:ASP288
|
3.2
|
75.3
|
1.0
|
|
CG
|
A:ASN286
|
3.3
|
45.3
|
1.0
|
|
C
|
A:TYR290
|
3.4
|
64.0
|
1.0
|
|
OD2
|
A:ASP288
|
3.5
|
77.8
|
1.0
|
|
ND2
|
A:ASN286
|
3.9
|
56.6
|
1.0
|
|
CA
|
A:ASP284
|
3.9
|
53.3
|
1.0
|
|
CB
|
A:ASP284
|
3.9
|
51.8
|
1.0
|
|
N
|
A:ILE285
|
4.0
|
55.0
|
1.0
|
|
CB
|
A:ASP292
|
4.0
|
38.2
|
1.0
|
|
CA
|
A:TYR290
|
4.1
|
53.7
|
1.0
|
|
N
|
A:ASN286
|
4.2
|
48.9
|
1.0
|
|
CB
|
A:TYR290
|
4.2
|
49.6
|
1.0
|
|
N
|
A:TYR290
|
4.3
|
62.5
|
1.0
|
|
N
|
A:ASP292
|
4.3
|
51.2
|
1.0
|
|
C
|
A:ASP284
|
4.3
|
53.6
|
1.0
|
|
C
|
A:ALA291
|
4.3
|
45.4
|
1.0
|
|
N
|
A:ALA291
|
4.4
|
53.2
|
1.0
|
|
CA
|
A:ALA291
|
4.5
|
46.0
|
1.0
|
|
CB
|
A:ASP288
|
4.5
|
52.4
|
1.0
|
|
CB
|
A:ASN286
|
4.6
|
35.0
|
1.0
|
|
N
|
A:ASP288
|
4.6
|
64.2
|
1.0
|
|
O
|
A:GLN320
|
4.7
|
57.9
|
1.0
|
|
CA
|
A:ASP292
|
4.7
|
39.8
|
1.0
|
|
O
|
A:ALA291
|
4.8
|
41.9
|
1.0
|
|
CA
|
A:ASN286
|
4.8
|
48.3
|
1.0
|
|
N
|
A:GLN320
|
4.8
|
42.7
|
1.0
|
|
O
|
A:THR283
|
4.9
|
38.1
|
1.0
|
|
CD2
|
A:LEU319
|
5.0
|
38.6
|
1.0
|
|
CA
|
A:ASP288
|
5.0
|
41.6
|
1.0
|
|
Manganese binding site 3 out
of 8 in 6msu
Go back to
Manganese Binding Sites List in 6msu
Manganese binding site 3 out
of 8 in the Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F
 Mono view
 Stereo pair view
|
|
A full contact list of Manganese with other atoms in the Mn binding
site number 3 of Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mn1029
b:91.0
occ:1.00
|
OD1
|
A:ASP351
|
2.1
|
69.4
|
1.0
|
|
OD1
|
A:ASP357
|
2.2
|
56.0
|
1.0
|
|
OD2
|
A:ASP351
|
2.2
|
69.4
|
1.0
|
|
OD1
|
A:ASP349
|
2.3
|
55.3
|
1.0
|
|
OD1
|
A:ASP353
|
2.3
|
72.5
|
1.0
|
|
O
|
A:PHE355
|
2.4
|
52.6
|
1.0
|
|
OD2
|
A:ASP353
|
2.4
|
71.0
|
1.0
|
|
CG
|
A:ASP351
|
2.5
|
57.0
|
1.0
|
|
OD2
|
A:ASP357
|
2.6
|
52.5
|
1.0
|
|
CG
|
A:ASP353
|
2.7
|
60.5
|
1.0
|
|
CG
|
A:ASP357
|
2.7
|
49.0
|
1.0
|
|
CG
|
A:ASP349
|
3.5
|
52.3
|
1.0
|
|
C
|
A:PHE355
|
3.6
|
54.3
|
1.0
|
|
CB
|
A:ASP351
|
4.0
|
44.2
|
1.0
|
|
CB
|
A:ASP353
|
4.1
|
47.8
|
1.0
|
|
OD2
|
A:ASP349
|
4.2
|
50.5
|
1.0
|
|
O
|
A:GLY378
|
4.2
|
44.7
|
1.0
|
|
CB
|
A:ASP357
|
4.2
|
38.9
|
1.0
|
|
N
|
A:ASP351
|
4.4
|
61.3
|
1.0
|
|
N
|
A:PHE355
|
4.4
|
42.7
|
1.0
|
|
N
|
A:ASP353
|
4.4
|
36.5
|
1.0
|
|
C
|
A:ASN356
|
4.4
|
41.9
|
1.0
|
|
CA
|
A:PHE355
|
4.4
|
47.7
|
1.0
|
|
ND2
|
A:ASN377
|
4.4
|
36.2
|
1.0
|
|
CA
|
A:ASP349
|
4.6
|
52.3
|
1.0
|
|
O
|
A:ASN356
|
4.6
|
40.0
|
1.0
|
|
N
|
A:ASP357
|
4.6
|
28.9
|
1.0
|
|
N
|
A:GLY378
|
4.6
|
37.1
|
1.0
|
|
CB
|
A:PHE355
|
4.6
|
44.6
|
1.0
|
|
N
|
A:ASN356
|
4.6
|
43.0
|
1.0
|
|
CB
|
A:ASP349
|
4.7
|
47.5
|
1.0
|
|
CB
|
A:ASN377
|
4.7
|
25.0
|
1.0
|
|
CA
|
A:ASP351
|
4.7
|
57.3
|
1.0
|
|
CA
|
A:ASN356
|
4.7
|
38.4
|
1.0
|
|
N
|
A:LEU350
|
4.7
|
43.6
|
1.0
|
|
CA
|
A:ASP353
|
4.8
|
50.6
|
1.0
|
|
CA
|
A:ASP357
|
4.9
|
35.7
|
1.0
|
|
N
|
A:GLN352
|
4.9
|
49.9
|
1.0
|
|
C
|
A:ASP349
|
4.9
|
49.8
|
1.0
|
|
CA
|
A:ASN377
|
5.0
|
29.1
|
1.0
|
|
Manganese binding site 4 out
of 8 in 6msu
Go back to
Manganese Binding Sites List in 6msu
Manganese binding site 4 out
of 8 in the Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F
 Mono view
 Stereo pair view
|
|
A full contact list of Manganese with other atoms in the Mn binding
site number 4 of Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mn1030
b:0.4
occ:1.00
|
OD1
|
A:ASP415
|
2.2
|
65.8
|
1.0
|
|
OD2
|
A:ASP421
|
2.2
|
56.2
|
1.0
|
|
OD1
|
A:ASP421
|
2.2
|
64.6
|
1.0
|
|
O
|
A:TYR419
|
2.2
|
34.6
|
1.0
|
|
OD1
|
A:ASN417
|
2.2
|
62.2
|
1.0
|
|
CG
|
A:ASP421
|
2.4
|
51.4
|
1.0
|
|
OD1
|
A:ASP413
|
2.9
|
60.3
|
1.0
|
|
CG
|
A:ASP415
|
3.0
|
62.1
|
1.0
|
|
CG
|
A:ASN417
|
3.1
|
59.6
|
1.0
|
|
OD2
|
A:ASP415
|
3.2
|
54.4
|
1.0
|
|
C
|
A:TYR419
|
3.4
|
47.7
|
1.0
|
|
ND2
|
A:ASN417
|
3.5
|
52.1
|
1.0
|
|
C
|
A:PRO420
|
3.9
|
31.1
|
1.0
|
|
CB
|
A:ASP421
|
3.9
|
37.1
|
1.0
|
|
CG
|
A:ASP413
|
4.0
|
54.3
|
1.0
|
|
O
|
A:PRO420
|
4.0
|
50.5
|
1.0
|
|
N
|
A:ALA437
|
4.0
|
33.6
|
1.0
|
|
N
|
A:ASP421
|
4.2
|
31.2
|
1.0
|
|
CA
|
A:PRO420
|
4.2
|
29.8
|
1.0
|
|
N
|
A:PRO420
|
4.2
|
42.9
|
1.0
|
|
CB
|
A:ALA437
|
4.3
|
35.8
|
1.0
|
|
N
|
A:ASP415
|
4.3
|
59.1
|
1.0
|
|
CA
|
A:TYR419
|
4.4
|
51.0
|
1.0
|
|
CA
|
A:ASP413
|
4.4
|
37.1
|
1.0
|
|
CB
|
A:ASP415
|
4.4
|
51.6
|
1.0
|
|
CB
|
A:ASN417
|
4.4
|
51.8
|
1.0
|
|
N
|
A:TYR419
|
4.5
|
46.7
|
1.0
|
|
CA
|
A:ASP421
|
4.5
|
36.6
|
1.0
|
|
N
|
A:ILE414
|
4.5
|
23.1
|
1.0
|
|
CB
|
A:TYR419
|
4.6
|
59.6
|
1.0
|
|
CA
|
A:ALA437
|
4.7
|
28.2
|
1.0
|
|
CB
|
A:ASP413
|
4.7
|
47.1
|
1.0
|
|
C
|
A:ASP413
|
4.7
|
37.0
|
1.0
|
|
N
|
A:ASN417
|
4.8
|
51.5
|
1.0
|
|
OD2
|
A:ASP413
|
4.8
|
40.7
|
1.0
|
|
CA
|
A:ASP415
|
4.9
|
50.4
|
1.0
|
|
CA
|
A:ARG436
|
4.9
|
37.7
|
1.0
|
|
O
|
A:ALA437
|
4.9
|
59.0
|
1.0
|
|
C
|
A:ARG436
|
4.9
|
43.4
|
1.0
|
|
CB
|
A:ARG436
|
5.0
|
42.4
|
1.0
|
|
Manganese binding site 5 out
of 8 in 6msu
Go back to
Manganese Binding Sites List in 6msu
Manganese binding site 5 out
of 8 in the Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F
 Mono view
 Stereo pair view
|
|
A full contact list of Manganese with other atoms in the Mn binding
site number 5 of Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mn1031
b:85.3
occ:1.00
|
OD1
|
A:ASP599
|
2.1
|
83.5
|
1.0
|
|
OE2
|
A:GLU636
|
2.1
|
87.3
|
1.0
|
|
OD2
|
A:ASP599
|
2.2
|
78.9
|
1.0
|
|
O
|
A:VAL601
|
2.3
|
55.6
|
1.0
|
|
OE1
|
A:GLU636
|
2.3
|
81.6
|
1.0
|
|
O
|
A:CYS596
|
2.3
|
59.0
|
1.0
|
|
CG
|
A:ASP599
|
2.5
|
86.3
|
1.0
|
|
CD
|
A:GLU636
|
2.5
|
78.8
|
1.0
|
|
C
|
A:CYS596
|
3.5
|
64.6
|
1.0
|
|
C
|
A:VAL601
|
3.5
|
54.5
|
1.0
|
|
CB
|
A:ASP599
|
4.0
|
65.8
|
1.0
|
|
CA
|
A:GLY597
|
4.0
|
79.0
|
1.0
|
|
CG
|
A:GLU636
|
4.0
|
72.1
|
1.0
|
|
N
|
A:VAL601
|
4.1
|
77.7
|
1.0
|
|
N
|
A:GLY597
|
4.2
|
55.6
|
1.0
|
|
N
|
A:LYS603
|
4.3
|
41.0
|
1.0
|
|
CA
|
A:VAL601
|
4.4
|
68.5
|
1.0
|
|
N
|
A:CYS602
|
4.4
|
46.9
|
1.0
|
|
CA
|
A:CYS602
|
4.4
|
51.3
|
1.0
|
|
N
|
A:ASP599
|
4.5
|
75.8
|
1.0
|
|
C
|
A:GLY597
|
4.5
|
78.8
|
1.0
|
|
CA
|
A:CYS596
|
4.5
|
68.5
|
1.0
|
|
CE
|
A:LYS603
|
4.6
|
74.5
|
1.0
|
|
N
|
A:GLU598
|
4.6
|
68.6
|
1.0
|
|
CA
|
A:ASP599
|
4.7
|
72.6
|
1.0
|
|
CG
|
A:LYS603
|
4.7
|
66.6
|
1.0
|
|
C
|
A:CYS602
|
4.8
|
53.9
|
1.0
|
|
CB
|
A:LYS603
|
4.8
|
72.5
|
1.0
|
|
CB
|
A:GLU636
|
4.8
|
66.9
|
1.0
|
|
CB
|
A:CYS596
|
4.9
|
70.0
|
1.0
|
|
Manganese binding site 6 out
of 8 in 6msu
Go back to
Manganese Binding Sites List in 6msu
Manganese binding site 6 out
of 8 in the Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F
 Mono view
 Stereo pair view
|
|
A full contact list of Manganese with other atoms in the Mn binding
site number 6 of Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mn708
b:46.7
occ:1.00
|
O
|
B:HOH801
|
2.0
|
52.5
|
1.0
|
|
O
|
B:HOH802
|
2.1
|
51.0
|
1.0
|
|
OD1
|
C:ASP8
|
2.1
|
43.4
|
1.0
|
|
OE1
|
B:GLU220
|
2.1
|
43.2
|
1.0
|
|
OG
|
B:SER123
|
2.2
|
40.5
|
1.0
|
|
OG
|
B:SER121
|
2.2
|
37.2
|
1.0
|
|
CD
|
B:GLU220
|
2.9
|
52.2
|
1.0
|
|
CB
|
B:SER121
|
3.2
|
37.9
|
1.0
|
|
CG
|
B:GLU220
|
3.3
|
26.0
|
1.0
|
|
CG
|
C:ASP8
|
3.3
|
44.6
|
1.0
|
|
CB
|
B:SER123
|
3.5
|
47.2
|
1.0
|
|
OE2
|
B:GLU220
|
3.9
|
59.5
|
1.0
|
|
O
|
B:ALA218
|
4.1
|
50.0
|
1.0
|
|
CB
|
C:ASP8
|
4.1
|
38.4
|
1.0
|
|
N
|
B:SER123
|
4.2
|
35.3
|
1.0
|
|
OD2
|
C:ASP8
|
4.2
|
37.2
|
1.0
|
|
OD1
|
B:ASP119
|
4.3
|
40.4
|
1.0
|
|
CA
|
C:ASP8
|
4.3
|
30.7
|
1.0
|
|
OD2
|
B:ASP119
|
4.3
|
31.8
|
1.0
|
|
CB
|
B:ASP251
|
4.4
|
35.6
|
1.0
|
|
CA
|
B:SER123
|
4.5
|
42.0
|
1.0
|
|
CA
|
B:SER121
|
4.5
|
37.9
|
1.0
|
|
CG
|
B:ASP119
|
4.7
|
40.4
|
1.0
|
|
CB
|
B:GLU220
|
4.7
|
24.9
|
1.0
|
|
C
|
B:SER121
|
4.7
|
44.3
|
1.0
|
|
N
|
B:TYR122
|
4.8
|
41.1
|
1.0
|
|
C
|
C:ASP8
|
5.0
|
39.7
|
1.0
|
|
Manganese binding site 7 out
of 8 in 6msu
Go back to
Manganese Binding Sites List in 6msu
Manganese binding site 7 out
of 8 in the Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F
 Mono view
 Stereo pair view
|
|
A full contact list of Manganese with other atoms in the Mn binding
site number 7 of Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mn709
b:0.0
occ:1.00
|
OD1
|
B:ASP126
|
2.3
|
62.1
|
1.0
|
|
OD1
|
B:ASP251
|
2.4
|
58.9
|
1.0
|
|
OD2
|
B:ASP251
|
2.7
|
92.2
|
1.0
|
|
O
|
B:SER123
|
2.7
|
40.4
|
1.0
|
|
OD2
|
B:ASP127
|
2.8
|
68.5
|
1.0
|
|
CG
|
B:ASP251
|
2.9
|
55.5
|
1.0
|
|
OD1
|
B:ASP127
|
3.1
|
64.4
|
1.0
|
|
CL
|
C:CL101
|
3.2
|
64.0
|
1.0
|
|
CG
|
B:ASP126
|
3.2
|
53.6
|
1.0
|
|
CG
|
B:ASP127
|
3.3
|
58.7
|
1.0
|
|
OD2
|
B:ASP126
|
3.4
|
50.5
|
1.0
|
|
C
|
B:SER123
|
3.7
|
44.0
|
1.0
|
|
CB
|
B:ASP251
|
4.3
|
35.6
|
1.0
|
|
CA
|
B:SER123
|
4.4
|
42.0
|
1.0
|
|
CB
|
B:SER123
|
4.5
|
47.2
|
1.0
|
|
N
|
B:MET124
|
4.5
|
38.9
|
1.0
|
|
CA
|
B:MET124
|
4.6
|
48.7
|
1.0
|
|
CB
|
B:ASP126
|
4.6
|
49.4
|
1.0
|
|
CB
|
B:ASP127
|
4.7
|
52.2
|
1.0
|
|
CD
|
C:PRO11
|
4.8
|
42.8
|
1.0
|
|
N
|
B:ASP126
|
4.9
|
47.1
|
1.0
|
|
CB
|
C:PRO10
|
4.9
|
37.8
|
1.0
|
|
C
|
B:ASP126
|
5.0
|
62.1
|
1.0
|
|
Manganese binding site 8 out
of 8 in 6msu
Go back to
Manganese Binding Sites List in 6msu
Manganese binding site 8 out
of 8 in the Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F
 Mono view
 Stereo pair view
|
|
A full contact list of Manganese with other atoms in the Mn binding
site number 8 of Integrin ALPHAVBETA3 in Complex with Eeti-II 2.5F within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mn710
b:0.8
occ:1.00
|
OD1
|
B:ASP217
|
2.2
|
37.0
|
1.0
|
|
O
|
B:PRO219
|
2.2
|
31.5
|
1.0
|
|
OE2
|
B:GLU220
|
2.2
|
59.5
|
1.0
|
|
OD1
|
B:ASN215
|
2.2
|
49.2
|
1.0
|
|
O
|
B:ASP217
|
2.2
|
36.6
|
1.0
|
|
OD2
|
B:ASP158
|
2.2
|
42.0
|
1.0
|
|
C
|
B:ASP217
|
3.3
|
47.2
|
1.0
|
|
C
|
B:PRO219
|
3.3
|
29.3
|
1.0
|
|
CG
|
B:ASN215
|
3.3
|
50.8
|
1.0
|
|
CG
|
B:ASP217
|
3.3
|
53.4
|
1.0
|
|
CG
|
B:ASP158
|
3.4
|
51.8
|
1.0
|
|
CD
|
B:GLU220
|
3.4
|
52.2
|
1.0
|
|
CA
|
B:GLU220
|
3.8
|
45.8
|
1.0
|
|
N
|
B:ASP217
|
3.9
|
44.5
|
1.0
|
|
CA
|
B:ASP217
|
4.0
|
41.9
|
1.0
|
|
ND2
|
B:ASN215
|
4.0
|
47.6
|
1.0
|
|
CB
|
B:ASP158
|
4.0
|
35.8
|
1.0
|
|
N
|
B:GLU220
|
4.0
|
26.6
|
1.0
|
|
OD2
|
B:ASP217
|
4.2
|
28.4
|
1.0
|
|
CB
|
B:ASP217
|
4.2
|
38.0
|
1.0
|
|
OE1
|
B:GLU220
|
4.3
|
43.2
|
1.0
|
|
C
|
B:ALA218
|
4.3
|
41.8
|
1.0
|
|
CG
|
B:GLU220
|
4.3
|
26.0
|
1.0
|
|
N
|
B:PRO219
|
4.4
|
31.6
|
1.0
|
|
N
|
B:ALA218
|
4.4
|
26.4
|
1.0
|
|
OD1
|
B:ASP158
|
4.4
|
22.9
|
1.0
|
|
CA
|
B:PRO219
|
4.4
|
22.9
|
1.0
|
|
O
|
B:ALA218
|
4.5
|
50.0
|
1.0
|
|
CB
|
B:ASN215
|
4.5
|
28.8
|
1.0
|
|
CB
|
B:GLU220
|
4.5
|
24.9
|
1.0
|
|
NE2
|
B:HIS255
|
4.5
|
29.6
|
1.0
|
|
CD2
|
B:HIS255
|
4.7
|
26.0
|
1.0
|
|
CA
|
B:ALA218
|
4.8
|
30.0
|
1.0
|
|
C
|
B:ARG216
|
4.8
|
29.1
|
1.0
|
|
C
|
B:GLU220
|
4.9
|
36.3
|
1.0
|
|
N
|
B:ARG216
|
4.9
|
27.0
|
1.0
|
|
O
|
B:VAL157
|
4.9
|
32.0
|
1.0
|
|
Reference:
J.F.Van Agthoven,
M.A.Arnaout.
Integrin ALPHAVBETA3 Ectodomain Bound Eeti-II 2.5F To Be Published.
Page generated: Sun Oct 6 05:29:59 2024
|
