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Manganese in PDB 6h9i: CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease

Protein crystallography data

The structure of CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease, PDB code: 6h9i was solved by P.Pausch, G.Bange, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.76 / 2.29
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 62.850, 84.237, 71.472, 90.00, 100.35, 90.00
R / Rfree (%) 22.3 / 25.4

Manganese Binding Sites:

The binding sites of Manganese atom in the CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease (pdb code 6h9i). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease, PDB code: 6h9i:

Manganese binding site 1 out of 1 in 6h9i

Go back to Manganese Binding Sites List in 6h9i
Manganese binding site 1 out of 1 in the CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of CSF5, Crispr-Cas Type IV CAS6 Crrna Endonuclease within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn302

b:70.9
occ:1.00
NE2 B:HIS194 2.1 75.8 1.0
OD1 B:ASP192 2.2 61.7 1.0
CE1 B:HIS194 2.7 76.3 1.0
CD2 B:HIS194 3.0 68.6 1.0
CG B:ASP192 3.3 61.8 1.0
OD2 B:ASP192 3.7 64.3 1.0
ND1 B:HIS194 3.8 72.2 1.0
CG B:HIS194 3.9 66.2 1.0
O B:ASP192 4.4 59.2 1.0
O B:ILE193 4.4 60.6 1.0
CB B:ASP192 4.5 56.7 1.0
C B:ASP192 4.7 57.6 1.0
CA B:ASP192 4.7 59.0 1.0

Reference:

A.Ozcan, P.Pausch, A.Linden, A.Wulf, K.Schuhle, J.Heider, H.Urlaub, T.Heimerl, G.Bange, L.Randau. Type IV Crispr Rna Processing and Effector Complex Formation in Aromatoleum Aromaticum. Nat Microbiol V. 4 89 2019.
ISSN: ESSN 2058-5276
PubMed: 30397343
DOI: 10.1038/S41564-018-0274-8
Page generated: Tue Dec 15 04:54:21 2020

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