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Manganese in PDB 6gyx: Crystal Structure of Daca From Staphylococcus Aureus in Complex with Apcpp

Enzymatic activity of Crystal Structure of Daca From Staphylococcus Aureus in Complex with Apcpp

All present enzymatic activity of Crystal Structure of Daca From Staphylococcus Aureus in Complex with Apcpp:
2.7.7.85;

Protein crystallography data

The structure of Crystal Structure of Daca From Staphylococcus Aureus in Complex with Apcpp, PDB code: 6gyx was solved by T.Tosi, P.S.Freemont, A.Grundling, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.28 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.092, 80.424, 96.195, 90.00, 90.00, 90.00
R / Rfree (%) 23.1 / 25.8

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Daca From Staphylococcus Aureus in Complex with Apcpp (pdb code 6gyx). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Daca From Staphylococcus Aureus in Complex with Apcpp, PDB code: 6gyx:

Manganese binding site 1 out of 1 in 6gyx

Go back to Manganese Binding Sites List in 6gyx
Manganese binding site 1 out of 1 in the Crystal Structure of Daca From Staphylococcus Aureus in Complex with Apcpp


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Daca From Staphylococcus Aureus in Complex with Apcpp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn302

b:0.0
occ:1.00
H3A1 B:APC301 1.4 0.8 1.0
H3A2 B:APC301 2.0 0.8 1.0
C3A B:APC301 2.0 0.9 1.0
PA B:APC301 3.2 0.6 1.0
O1A B:APC301 3.2 0.9 1.0
PB B:APC301 3.6 0.4 1.0
O2B B:APC301 4.0 0.1 1.0
O5' B:APC301 4.1 0.7 1.0
O3B B:APC301 4.3 0.1 1.0
O2A B:APC301 4.3 0.1 1.0
HG1 B:THR207 4.5 0.6 1.0
O1B B:APC301 4.7 0.8 1.0
H5'1 B:APC301 4.9 0.5 1.0
OG1 B:THR207 4.9 0.2 1.0
C5' B:APC301 4.9 0.9 1.0

Reference:

T.Tosi, F.Hoshiga, C.Millership, R.Singh, C.Eldrid, D.Patin, D.Mengin-Lecreulx, K.Thalassinos, P.Freemont, A.Grundling. Inhibition of the Staphylococcus Aureus C-Di-Amp Cyclase Daca By Direct Interaction with the Phosphoglucosamine Mutase Glmm. Plos Pathog. V. 15 07537 2019.
ISSN: ESSN 1553-7374
PubMed: 30668586
DOI: 10.1371/JOURNAL.PPAT.1007537
Page generated: Tue Dec 15 04:54:01 2020

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