Manganese in PDB 6ady: Crystal Structure of the Zika Virus NS3 Helicase (Adp-MN2+ Complex, Form 2)

All present enzymatic activity of Crystal Structure of the Zika Virus NS3 Helicase (Adp-MN2+ Complex, Form 2):
3.4.21.91; 3.6.1.15; 3.6.4.13;

The structure of Crystal Structure of the Zika Virus NS3 Helicase (Adp-MN2+ Complex, Form 2), PDB code: 6ady was solved by J.Fang, G.Lu, P.Gong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.51 / 1.90
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	53.681, 68.376, 56.717, 90.00, 92.95, 90.00
R / Rfree (%)	17.8 / 22.6

The binding sites of Manganese atom in the Crystal Structure of the Zika Virus NS3 Helicase (Adp-MN2+ Complex, Form 2) (pdb code 6ady). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of the Zika Virus NS3 Helicase (Adp-MN2+ Complex, Form 2), PDB code: 6ady:

Manganese binding site 1 out of 1 in the Crystal Structure of the Zika Virus NS3 Helicase (Adp-MN2+ Complex, Form 2)


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of the Zika Virus NS3 Helicase (Adp-MN2+ Complex, Form 2) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn702 b:25.6 occ:1.00 O A:HOH851 2.1 16.1 1.0 O A:HOH818 2.1 24.1 1.0 O1B A:ADP701 2.2 18.5 0.8 OG1 A:THR201 2.3 18.3 1.0 OE2 A:GLU286 2.3 28.4 1.0 O A:HOH890 2.4 23.4 1.0 CB A:THR201 3.4 24.2 1.0 PB A:ADP701 3.4 18.9 0.8 CD A:GLU286 3.4 31.3 1.0 O A:HOH1049 3.5 25.2 0.9 O2B A:ADP701 3.6 19.7 0.8 OD1 A:ASP285 3.7 23.6 1.0 OE1 A:GLU286 3.9 30.0 1.0 O1A A:ADP701 4.0 23.4 0.8 N A:THR201 4.0 20.5 1.0 OD2 A:ASP285 4.2 21.4 1.0 CA A:THR201 4.3 19.5 1.0 CG A:ASP285 4.3 19.7 1.0 CG2 A:THR201 4.5 20.9 1.0 O3B A:ADP701 4.5 21.0 0.8 O3A A:ADP701 4.5 19.5 0.8 CB A:LYS200 4.6 20.6 1.0 PA A:ADP701 4.7 22.2 0.8 CG A:GLU286 4.7 17.8 1.0 CE A:LYS200 4.7 20.1 1.0 O A:HOH1021 4.8 25.2 0.9 O2A A:ADP701 4.9 21.4 0.8 C A:LYS200 5.0 22.2 1.0

J.Fang, X.Jing, G.Lu, Y.Xu, P.Gong. Crystallographic Snapshots of the Zika Virus NS3 Helicase Help Visualize the Reactant Water Replenishment. Acs Infect Dis V. 5 177 2019.
ISSN: ESSN 2373-8227
PubMed: 30672289
DOI: 10.1021/ACSINFECDIS.8B00214