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Manganese in PDB 5ovo: Structure of Drag-Glnz-DELTA42-54 Complex From Azospirillum Brasilense

Protein crystallography data

The structure of Structure of Drag-Glnz-DELTA42-54 Complex From Azospirillum Brasilense, PDB code: 5ovo was solved by C.L.Berthold, M.Hogbom, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.60 / 1.55
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 116.740, 116.740, 105.616, 90.00, 90.00, 120.00
R / Rfree (%) 14.4 / 16.5

Other elements in 5ovo:

The structure of Structure of Drag-Glnz-DELTA42-54 Complex From Azospirillum Brasilense also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Manganese Binding Sites:

The binding sites of Manganese atom in the Structure of Drag-Glnz-DELTA42-54 Complex From Azospirillum Brasilense (pdb code 5ovo). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Structure of Drag-Glnz-DELTA42-54 Complex From Azospirillum Brasilense, PDB code: 5ovo:

Manganese binding site 1 out of 1 in 5ovo

Go back to Manganese Binding Sites List in 5ovo
Manganese binding site 1 out of 1 in the Structure of Drag-Glnz-DELTA42-54 Complex From Azospirillum Brasilense


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structure of Drag-Glnz-DELTA42-54 Complex From Azospirillum Brasilense within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mn202

b:24.1
occ:1.00
O B:HOH356 3.1 31.7 1.0
N B:GLY27 3.2 10.6 1.0
N B:GLN26 3.3 11.8 1.0
O B:HOH381 3.3 20.2 1.0
NH1 A:ARG107 3.4 11.6 1.0
CD A:ARG103 3.5 11.5 1.0
CA B:GLN26 3.9 12.1 1.0
CB B:GLN26 4.0 13.1 1.0
C B:GLN26 4.0 12.4 1.0
CA B:GLY27 4.0 10.8 1.0
CA B:ILE25 4.1 11.4 1.0
NE A:ARG103 4.1 12.7 1.0
C B:ILE25 4.2 11.6 1.0
OXT B:LEU112 4.3 21.7 1.0
O B:GLY24 4.3 9.2 1.0
NH1 A:ARG103 4.4 15.6 1.0
CG2 B:ILE25 4.5 12.0 1.0
CZ A:ARG103 4.5 14.2 1.0
CZ A:ARG107 4.6 10.5 1.0
CG A:ARG103 4.8 11.3 1.0
NH2 A:ARG107 4.8 12.2 1.0
CB B:ILE25 4.8 10.9 1.0
O B:GLY27 4.9 11.8 1.0
OE1 B:GLN26 4.9 22.0 1.0
C B:GLY27 5.0 11.2 1.0

Reference:

C.L.Berthold, M.Hogbom. Structure of Drag-Glnz-DELTA42-54 Complex From Azospirillum Brasilense To Be Published.
Page generated: Sun Oct 6 02:25:06 2024

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