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Manganese in PDB 5ogl: Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog
Enzymatic activity of Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog
All present enzymatic activity of Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog:
2.4.99.19;
2.4.99.19;
Protein crystallography data
The structure of Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog, PDB code: 5ogl
was solved by
M.Napiorkowska,
J.Boilevin,
T.Sovdat,
T.Darbre,
J.-L.Reymond,
M.Aebi,
K.P.Locher,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 47.77 / 2.70 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 83.940, 116.180, 172.020, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 21.7 / 24.4 |
Other elements in 5ogl:
The structure of Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog also contains other interesting chemical elements:
| Sodium | (Na) | 1 atom |
Manganese Binding Sites:
The binding sites of Manganese atom in the Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog
(pdb code 5ogl). This binding sites where shown within
5.0 Angstroms radius around Manganese atom.
In total 2 binding sites of Manganese where determined in the Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog, PDB code: 5ogl:
Jump to Manganese binding site number: 1; 2;
In total 2 binding sites of Manganese where determined in the Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog, PDB code: 5ogl:
Jump to Manganese binding site number: 1; 2;
Manganese binding site 1 out of 2 in 5ogl
Go back to
Manganese Binding Sites List in 5ogl
Manganese binding site 1 out
of 2 in the Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Manganese with other atoms in the Mn binding
site number 1 of Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog within 5.0Å range:
|
Manganese binding site 2 out of 2 in 5ogl
Go back to
Manganese Binding Sites List in 5ogl
Manganese binding site 2 out
of 2 in the Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Manganese with other atoms in the Mn binding
site number 2 of Structure of Bacterial Oligosaccharyltransferase Pglb in Complex with An Acceptor Peptide and An Lipid-Linked Oligosaccharide Analog within 5.0Å range:
|
Reference:
M.Napiorkowska,
J.Boilevin,
T.Sovdat,
T.Darbre,
J.L.Reymond,
M.Aebi,
K.P.Locher.
Molecular Basis of Lipid-Linked Oligosaccharide Recognition and Processing By Bacterial Oligosaccharyltransferase. Nat. Struct. Mol. Biol. V. 24 1100 2017.
ISSN: ESSN 1545-9985
PubMed: 29058712
DOI: 10.1038/NSMB.3491
Page generated: Sun Oct 6 02:20:24 2024
ISSN: ESSN 1545-9985
PubMed: 29058712
DOI: 10.1038/NSMB.3491
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